Tag Archives: Damien Thompson

Dynamic molecular switches for brainlike computing at the University of Limerick

Aren’t memristors proof that brainlike computing at the molecular and atomic levels is possible? It seems I have misunderstood memristors according to this November 21, 2022 news item on ScienceDaily,

A breakthrough discovery at University of Limerick in Ireland has revealed for the first time that unconventional brain-like computing at the tiniest scale of atoms and molecules is possible.

Researchers at University of Limerick’s Bernal Institute worked with an international team of scientists to create a new type of organic material that learns from its past behaviour.

The discovery of the ‘dynamic molecular switch’ that emulate[s] synaptic behaviour is revealed in a new study in the international journal Nature Materials.

The study was led by Damien Thompson, Professor of Molecular Modelling in UL’s Department of Physics and Director of SSPC, the UL-hosted Science Foundation Ireland Research Centre for Pharmaceuticals, together with Christian Nijhuis at the Centre for Molecules and Brain-Inspired Nano Systems in University of Twente [Netherlands] and Enrique del Barco from University of Central Florida.

A November 21, 2022 University of Limerick press release (also on EurekAlert), which originated the news item, provides more technical details about the research,

Working during lockdowns, the team developed a two-nanometre thick layer of molecules, which is 50,000 times thinner than a strand of hair and remembers its history as electrons pass through it.

Professor Thompson explained that the “switching probability and the values of the on/off states continually change in the molecular material, which provides a disruptive new alternative to conventional silicon-based digital switches that can only ever be either on or off”.

The newly discovered dynamic organic switch displays all the mathematical logic functions necessary for deep learning, successfully emulating Pavlovian ‘call and response’ synaptic brain-like behaviour.

The researchers demonstrated the new materials properties using extensive experimental characterisation and electrical measurements supported by multi-scale modelling spanning from predictive modelling of the molecular structures at the quantum level to analytical mathematical modelling of the electrical data.

To emulate the dynamical behaviour of synapses at the molecular level, the researchers combined fast electron transfer (akin to action potentials and fast depolarization processes in biology) with slow proton coupling limited by diffusion (akin to the role of biological calcium ions or neurotransmitters).

Since the electron transfer and proton coupling steps inside the material occur at very different time scales, the transformation can emulate the plastic behaviour of synapse neuronal junctions, Pavlovian learning, and all logic gates for digital circuits, simply by changing the applied voltage and the duration of voltage pulses during the synthesis, they explained.

“This was a great lockdown project, with Chris, Enrique and I pushing each other through zoom meetings and gargantuan email threads to bring our teams combined skills in materials modelling, synthesis and characterisation to the point where we could demonstrate these new brain-like computing properties,” explained Professor Thompson.

“The community has long known that silicon technology works completely differently to how our brains work and so we used new types of electronic materials based on soft molecules to emulate brain-like computing networks.”

The researchers explained that the method can in the future be applied to dynamic molecular systems driven by other stimuli such as light and coupled to different types of dynamic covalent bond formation.

This breakthrough opens up a whole new range of adaptive and reconfigurable systems, creating new opportunities in sustainable and green chemistry, from more efficient flow chemistry production of drug products and other value-added chemicals to development of new organic materials for high density computing and memory storage in big data centres.

“This is just the start. We are already busy expanding this next generation of intelligent molecular materials, which is enabling development of sustainable alternative technologies to tackle grand challenges in energy, environment, and health,” explained Professor Thompson.

Professor Norelee Kennedy, Vice President Research at UL, said: “Our researchers are continuously finding new ways of making more effective, more sustainable materials. This latest finding is very exciting, demonstrating the reach and ambition of our international collaborations and showcasing our world-leading ability at UL to encode useful properties into organic materials.”

Here’s a link to and a citation for the paper,

Dynamic molecular switches with hysteretic negative differential conductance emulating synaptic behaviour by Yulong Wang, Qian Zhang, Hippolyte P. A. G. Astier, Cameron Nickle, Saurabh Soni, Fuad A. Alami, Alessandro Borrini, Ziyu Zhang, Christian Honnigfort, Björn Braunschweig, Andrea Leoncini, Dong-Cheng Qi, Yingmei Han, Enrique del Barco, Damien Thompson & Christian A. Nijhuis. Nature Materials volume 21, pages 1403–1411 (2022) DOI: https://doi.org/10.1038/s41563-022-01402-2 Published: 21 November 2022 Issue Date: December 2022

This paper is behind a paywall.

Device with brainlike plasticity

A September 1, 2021 news item on ScienceDaily announces a new type of memristor from Texas A&M University (Texas A&M or TAMU) and the National University of Singapore (NUS)

In a discovery published in the journal Nature, an international team of researchers has described a novel molecular device with exceptional computing prowess.

Reminiscent of the plasticity of connections in the human brain, the device can be reconfigured on the fly for different computational tasks by simply changing applied voltages. Furthermore, like nerve cells can store memories, the same device can also retain information for future retrieval and processing.

Two of the universities involved in the research have issued news/press releases. I’m going to start with the September 1, 2021 Texas A&M University news release (also on EurekAlert), which originated the news item on ScienceDaily,

“The brain has the remarkable ability to change its wiring around by making and breaking connections between nerve cells. Achieving something comparable in a physical system has been extremely challenging,” said Dr. R. Stanley Williams [emphasis mine], professor in the Department of Electrical and Computer Engineering at Texas A&M University. “We have now created a molecular device with dramatic reconfigurability, which is achieved not by changing physical connections like in the brain, but by reprogramming its logic.”

Dr. T. Venkatesan, director of the Center for Quantum Research and Technology (CQRT) at the University of Oklahoma, Scientific Affiliate at National Institute of Standards and Technology, Gaithersburg, and adjunct professor of electrical and computer engineering at the National University of Singapore, added that their molecular device might in the future help design next-generation processing chips with enhanced computational power and speed, but consuming significantly reduced energy.

Whether it is the familiar laptop or a sophisticated supercomputer, digital technologies face a common nemesis, the von Neumann bottleneck. This delay in computational processing is a consequence of current computer architectures, wherein the memory, containing data and programs, is physically separated from the processor. As a result, computers spend a significant amount of time shuttling information between the two systems, causing the bottleneck. Also, despite extremely fast processor speeds, these units can be idling for extended amounts of time during periods of information exchange.

As an alternative to conventional electronic parts used for designing memory units and processors, devices called memristors offer a way to circumvent the von Neumann bottleneck. Memristors, such as those made of niobium dioxide and vanadium dioxide, transition from being an insulator to a conductor at a set temperature. This property gives these types of memristors the ability to perform computations and store data.

However, despite their many advantages, these metal oxide memristors are made of rare-earth elements and can operate only in restrictive temperature regimes. Hence, there has been an ongoing search for promising organic molecules that can perform a comparable memristive function, said Williams.

Dr. Sreebrata Goswami, a professor at the Indian Association for the Cultivation of Science, designed the material used in this work. The compound has a central metal atom (iron) bound to three phenyl azo pyridine organic molecules called ligands.

“This behaves like an electron sponge that can absorb as many as six electrons reversibly, resulting in seven different redox states,” said Sreebrata. “The interconnectivity between these states is the key behind the reconfigurability shown in this work.”

Dr. Sreetosh Goswami, a researcher at the National University of Singapore, devised this project by creating a tiny electrical circuit consisting of a 40-nanometer layer of molecular film sandwiched between a layer of gold on top and gold-infused nanodisc and indium tin oxide at the bottom.

On applying a negative voltage on the device, Sreetosh witnessed a current-voltage profile that was nothing like anyone had seen before. Unlike metal-oxide memristors that can switch from metal to insulator at only one fixed voltage, the organic molecular devices could switch back and forth from insulator to conductor at several discrete sequential voltages.

“So, if you think of the device as an on-off switch, as we were sweeping the voltage more negative, the device first switched from on to off, then off to on, then on to off and then back to on. I’ll say that we were just blown out of our seat,” said Venkatesan. “We had to convince ourselves that what we were seeing was real.”

Sreetosh and Sreebrata investigated the molecular mechanisms underlying the curious switching behavior using an imaging technique called Raman spectroscopy. In particular, they looked for spectral signatures in the vibrational motion of the organic molecule that could explain the multiple transitions. Their investigation revealed that sweeping the voltage negative triggered the ligands on the molecule to undergo a series of reduction, or electron-gaining, events that caused the molecule to transition between off state and on states.

Next, to describe the extremely complex current-voltage profile of the molecular device mathematically, Williams deviated from the conventional approach of basic physics-based equations. Instead, he described the behavior of the molecules using a decision tree algorithm with “if-then-else” statements, a commonplace line of code in several computer programs, particularly digital games.

“Video games have a structure where you have a character that does something, and then something occurs as a result. And so, if you write that out in a computer algorithm, they are if-then-else statements,” said Williams. “Here, the molecule is switching from on to off as a consequence of applied voltage, and that’s when I had the eureka moment to use decision trees to describe these devices, and it worked very well.” 

But the researchers went a step further to exploit these molecular devices to run programs for different real-world computational tasks. Sreetosh showed experimentally that their devices could perform fairly complex computations in a single time step and then be reprogrammed to perform another task in the next instant.

“It was quite extraordinary; our device was doing something like what the brain does, but in a very different way,” said Sreetosh. “When you’re learning something new or when you’re deciding, the brain can actually reconfigure and change physical wiring around. Similarly, we can logically reprogram or reconfigure our devices by giving them a different voltage pulse then they’ve seen before.” 

Venkatesan noted that it would take thousands of transistors to perform the same computational functions as one of their molecular devices with its different decision trees. Hence, he said their technology might first be used in handheld devices, like cell phones and sensors, and other applications where power is limited.

Other contributors to the research include Dr. Abhijeet Patra and Dr. Ariando from the National University of Singapore; Dr. Rajib Pramanick and Dr. Santi Prasad Rath from the Indian Association for the Cultivation of Science; Dr. Martin Foltin from Hewlett Packard Enterprise, Colorado; and Dr. Damien Thompson from the University of Limerick, Ireland.

Venkatesan said that this research is indicative of the future discoveries from this collaborative team, which will include the center of nanoscience and engineering at the Indian Institute of Science and the Microsystems and Nanotechnology Division at the NIST.

I’ve highlighted R. Stanley Williams because he and his team at HP [Hewlett Packard] Labs helped to kick off current memristor research in 2008 with the publication of two papers as per my April 5, 2010 posting,

In 2008, two memristor papers were published in Nature and Nature Nanotechnology, respectively. In the first (Nature, May 2008 [article still behind a paywall], a team at HP Labs claimed they had proved the existence of memristors (a fourth member of electrical engineering’s ‘Holy Trinity of the capacitor, resistor, and inductor’). In the second paper (Nature Nanotechnology, July 2008 [article still behind a paywall]) the team reported that they had achieved engineering control.

The novel memory device is based on a molecular system that can transition between on and off states at several discrete sequential voltages Courtesy: National University of Singapore

There is more technical detail in the September 2, 2022 NUS press release (also on EurekAlert),

Many electronic devices today are dependent on semiconductor logic circuits based on switches hard-wired to perform predefined logic functions. Physicists from the National University of Singapore (NUS), together with an international team of researchers, have developed a novel molecular memristor, or an electronic memory device, that has exceptional memory reconfigurability. 

Unlike hard-wired standard circuits, the molecular device can be reconfigured using voltage to embed different computational tasks. The energy-efficient new technology, which is capable of enhanced computational power and speed, can potentially be used in edge computing, as well as handheld devices and applications with limited power resource.

“This work is a significant breakthrough in our quest to design low-energy computing. The idea of using multiple switching in a single element draws inspiration from how the brain works and fundamentally reimagines the design strategy of a logic circuit,” said Associate Professor Ariando from the NUS Department of Physics who led the research.

The research was first published in the journal Nature on 1 September 2021, and carried out in collaboration with the Indian Association for the Cultivation of Science, Hewlett Packard Enterprise, the University of Limerick, the University of Oklahoma, and Texas A&M University.

Brain-inspired technology

“This new discovery can contribute to developments in edge computing as a sophisticated in-memory computing approach to overcome the von Neumann bottleneck, a delay in computational processing seen in many digital technologies due to the physical separation of memory storage from a device’s processor,” said Assoc Prof Ariando. The new molecular device also has the potential to contribute to designing next generation processing chips with enhanced computational power and speed.

“Similar to the flexibility and adaptability of connections in the human brain, our memory device can be reconfigured on the fly for different computational tasks by simply changing applied voltages. Furthermore, like how nerve cells can store memories, the same device can also retain information for future retrieval and processing,” said first author Dr Sreetosh Goswami, Research Fellow from the Department of Physics at NUS.

Research team member Dr Sreebrata Goswami, who was a Senior Research Scientist at NUS and previously Professor at the Indian Association for the Cultivation of Science, conceptualised and designed a molecular system belonging to the chemical family of phenyl azo pyridines that have a central metal atom bound to organic molecules called ligands. “These molecules are like electron sponges that can offer as many as six electron transfers resulting in five different molecular states. The interconnectivity between these states is the key behind the device’s reconfigurability,” explained Dr Sreebrata Goswami.

Dr Sreetosh Goswami created a tiny electrical circuit consisting a 40-nanometer layer of molecular film sandwiched between a top layer of gold, and a bottom layer of gold-infused nanodisc and indium tin oxide. He observed an unprecedented current-voltage profile upon applying a negative voltage to the device. Unlike conventional metal-oxide memristors that are switched on and off at only one fixed voltage, these organic molecular devices could switch between on-off states at several discrete sequential voltages.

Using an imaging technique called Raman spectroscopy, spectral signatures in the vibrational motion of the organic molecule were observed to explain the multiple transitions. Dr Sreebrata Goswami explained, “Sweeping the negative voltage triggered the ligands on the molecule to undergo a series of reduction, or electron-gaining which caused the molecule to transition between off and on states.”

The researchers described the behavior of the molecules using a decision tree algorithm with “if-then-else” statements, which is used in the coding of several computer programs, particularly digital games, as compared to the conventional approach of using basic physics-based equations.

New possibilities for energy-efficient devices

Building on their research, the team used the molecular memory devices to run programs for different real-world computational tasks. As a proof of concept, the team demonstrated that their technology could perform complex computations in a single step, and could be reprogrammed to perform another task in the next instant. An individual molecular memory device could perform the same computational functions as thousands of transistors, making the technology a more powerful and energy-efficient memory option.

“The technology might first be used in handheld devices, like cell phones and sensors, and other applications where power is limited,” added Assoc Prof Ariando.

The team in the midst of building new electronic devices incorporating their innovation, and working with collaborators to conduct simulation and benchmarking relating to existing technologies.

Other contributors to the research paper include Abhijeet Patra and Santi Prasad Rath from NUS, Rajib Pramanick from the Indian Association for the Cultivation of Science, Martin Foltin from Hewlett Packard Enterprise, Damien Thompson from the University of Limerick, T. Venkatesan from the University of Oklahoma, and R. Stanley Williams from Texas A&M University.

Here’s a link to and a citation for the paper,

Decision trees within a molecular memristor by Sreetosh Goswami, Rajib Pramanick, Abhijeet Patra, Santi Prasad Rath, Martin Foltin, A. Ariando, Damien Thompson, T. Venkatesan, Sreebrata Goswami & R. Stanley Williams. Nature volume 597, pages 51–56 (2021) DOI: https://doi.org/10.1038/s41586-021-03748-0 Published 01 September 2021 Issue Date 02 September 2021

This paper is behind a paywall.

Make your carbon atoms stand taller to improve electronic devices

Scientists from Ireland ((Tyndall National Institute at University College Cork [UCC]) and Singapore (National University of Singapore [NUS]) have jointly published a paper about how they achieved a ten-fold increase in the switching efficiency of electronic devices by changing one carbon atom. From the Jan. 21, 2013 news item on ScienceDaily,

These devices could provide new ways to combat overheating in mobile phones and laptops, and could also aid in electrical stimulation of tissue repair for wound healing.

The breakthrough creation of molecular devices with highly controllable electrical properties will appear in the February [2013] issue of Nature Nanotechnology. Dr. Damien Thompson at the Tyndall National Institute, UCC and a team of researchers at the National University of Singapore led by Prof. Chris Nijhuis designed and created the devices, which are based on molecules acting as electrical valves, or diode rectifiers.

Dr. Thompson explains, “These molecules are very useful because they allow current to flow through them when switched ON and block current flow when switched OFF. The results of the study show that simply adding one extra carbon is sufficient to improve the device performance by more than a factor of ten. We are following up lots of new ideas based on these results, and we hope ultimately to create a range of new components for electronic devices.” Dr. Thompson’s atom-level computer simulations showed how molecules with an odd number of carbon atoms stand straighter than molecules with an even number of carbon atoms. This allows them to pack together more closely. Tightly-packed assemblies of these molecules were formed on metal electrode surfaces by the Nijhuis group in Singapore and were found to be remarkably free of defects. These high quality devices can suppress leakage currents and so operate efficiently and reliably. The device can be cleanly switched on and off purely on the basis of the charge and shape of the molecules, just like in the biological nanomachines that regulate photosynthesis, cell division and tissue growth.

The Jan. ??, 2013 University College Cork news release, which originated the news item, provides more details,

The combined experiments and simulations show for the first time that minute improvements in molecule orientation and packing trigger changes in van der Waals forces that are sufficiently large to dramatically improve the performance of electronic devices. Dr. Thompson explains: “These van der Waals forces are the weakest of all intermolecular forces and only become significant when summed over large areas. Hence, up until now, the majority of research into ultra-small devices has used stronger “pi-pi” interactions to stick molecules together, and has ignored the much weaker, but ubiquitous, van der Waals interactions. The present study shows how van der Waals effects, which are present in every conceivable molecular scale device, can be tuned to optimise the performance of the device.”

The devices are based on molecules that act as diodes by allowing current to pass through them when operated at forward bias and blocking current when the bias is reversed. Molecular rectifiers were first proposed back in 1974, and advances in scientific computing have allowed molecular‐level design to be used over the past decade to develop new organic materials that provide better electrical responses. However, the relative importance of the interactions between the molecules, the nature of the molecule-metal contact and the influence of environmental effects have been questioned. This new research demonstrates that dramatic improvements in device performance may be achieved by controlling the van der Waals forces that pack the molecules together. Simply changing the number of carbon atoms by one provides significantly more stable and more reproducible devices that exhibit an order of magnitude improvement in ON/OFF ratio. The research findings demonstrate the feasibility of boosting device performances by creating tighter seals between molecules.

Here a citation and a link to the paper,

The role of van der Waals forces in the performance of molecular diodes by Nisachol Nerngchamnong, Li Yuan, Dong-Chen Qi, Jiang Li, Damien Thompson, & Christian A. Nijhuis. Nature Nanotechnology (2013) doi:10.1038/nnano.2012.238 Advance online publication: Jan. 6, 2013.

This paper is behind a paywall.