Tag Archives: disassembling

Disassembling silver nanoparticles

The notion of self-assembling material is a longstanding trope in the nanotechnology narrative. Scientists at the University of California at Santa Barbara (UCSB) have upended this trope with their work on disassembling the silver nanoparticles being used as a method of delivery for medications. From a June 9, 2014 news item on Azonano,

Scientists at UC Santa Barbara have designed a nanoparticle that has a couple of unique — and important — properties. Spherical in shape and silver in composition, it is encased in a shell coated with a peptide that enables it to target tumor cells. What’s more, the shell is etchable so those nanoparticles that don’t hit their target can be broken down and eliminated. The research findings appear today in the journal Nature Materials.

A june 8, 2014 UCSB news release (also on EurekAlert) by Julie Cohen, which originated the news item, explains the technology and this platform’s unique features in more detail,

The core of the nanoparticle employs a phenomenon called plasmonics. In plasmonics, nanostructured metals such as gold and silver resonate in light and concentrate the electromagnetic field near the surface. In this way, fluorescent dyes are enhanced, appearing about tenfold brighter than their natural state when no metal is present. When the core is etched, the enhancement goes away and the particle becomes dim.

UCSB’s Ruoslahti Research Laboratory also developed a simple etching technique using biocompatible chemicals to rapidly disassemble and remove the silver nanoparticles outside living cells. This method leaves only the intact nanoparticles for imaging or quantification, thus revealing which cells have been targeted and how much each cell internalized.

“The disassembly is an interesting concept for creating drugs that respond to a certain stimulus,” said Gary Braun, a postdoctoral associate in the Ruoslahti Lab in the Department of Molecular, Cellular and Developmental Biology (MCDB) and at Sanford-Burnham Medical Research Institute. “It also minimizes the off-target toxicity by breaking down the excess nanoparticles so they can then be cleared through the kidneys.”

This method for removing nanoparticles unable to penetrate target cells is unique. “By focusing on the nanoparticles that actually got into cells,” Braun said, “we can then understand which cells were targeted and study the tissue transport pathways in more detail.”

Some drugs are able to pass through the cell membrane on their own, but many drugs, especially RNA and DNA genetic drugs, are charged molecules that are blocked by the membrane. These drugs must be taken in through endocytosis, the process by which cells absorb molecules by engulfing them.

“This typically requires a nanoparticle carrier to protect the drug and carry it into the cell,” Braun said. “And that’s what we measured: the internalization of a carrier via endocytosis.”

Because the nanoparticle has a core shell structure, the researchers can vary its exterior coating and compare the efficiency of tumor targeting and internalization. Switching out the surface agent enables the targeting of different diseases — or organisms in the case of bacteria — through the use of different target receptors. According to Braun, this should turn into a way to optimize drug delivery where the core is a drug-containing vehicle.

“These new nanoparticles have some remarkable properties that have already proven useful as a tool in our work that relates to targeted drug delivery into tumors,” said Erkki Ruoslahti, adjunct distinguished professor in UCSB’s Center for Nanomedicine and MCDB department and at Sanford-Burnham Medical Research Institute. “They also have potential applications in combating infections. Dangerous infections caused by bacteria that are resistant to all antibiotics are getting more common, and new approaches to deal with this problem are desperately needed. Silver is a locally used antibacterial agent and our targeting technology may make it possible to use silver nanoparticles in treating infections anywhere in the body.”

Here’s a link to and a citation for the paper,

Etchable plasmonic nanoparticle probes to image and quantify cellular internalization by Gary B. Braun, Tomas Friman, Hong-Bo Pang, Alessia Pallaoro, Tatiana Hurtado de Mendoza, Anne-Mari A. Willmore, Venkata Ramana Kotamraju, Aman P. Mann, Zhi-Gang She, Kazuki N. Sugahara, Norbert O. Reich, Tambet Teesalu, & Erkki Ruoslahti. Nature Materials (2014) doi:10.1038/nmat3982 Published online 08 June 2014

This article is behind a paywall but there is a free preview via ReadCube Access.

Self-assembling and disassembling nanotrain network

A Nov. 11, 2013 University of Oxford news release (also on EurekAlert dated as Nov. 10, 2013) highlights the first item I’ve seen about a nanostructure which both assembles and disassembles itself,

Tiny self-assembling transport networks, powered by nano-scale motors and controlled by DNA, have been developed by scientists at Oxford University and Warwick University.

The system can construct its own network of tracks spanning tens of micrometres in length, transport cargo across the network and even dismantle the tracks.

Researchers were inspired by the melanophore, used by fish cells to control their colour. Tracks in the network all come from a central point, like the spokes of a bicycle wheel. Motor proteins transport pigment around the network, either concentrating it in the centre or spreading it throughout the network. Concentrating pigment in the centre makes the cells lighter, as the surrounding space is left empty and transparent.

The researchers have provided an image,

Nanotrain network created by scientists at Oxford University: green dye-carrying shuttles after 'refuelling' with ATP travel towards the center of the network with their cargoes of green dye. Credit: Adam Wollman/Oxford University

Nanotrain network created by scientists at Oxford University: green dye-carrying shuttles after ‘refuelling’ with ATP travel towards the center of the network with their cargoes of green dye. Credit: Adam Wollman/Oxford University

The news release goes on to describe the system,

The system developed by the Oxford University team is very similar [to the melanophore used by fish cells], and is built from DNA and a motor protein called kinesin. Powered by ATP fuel, kinesins move along the micro-tracks carrying control modules made from short strands of DNA. ‘Assembler’ nanobots are made with two kinesin proteins, allowing them to move tracks around to assemble the network, whereas the ‘shuttles’ only need one kinesin protein to travel along the tracks.

‘DNA is an excellent building block for constructing synthetic molecular systems, as we can program it to do whatever we need,’ said Adam Wollman, who conducted the research at Oxford University’s Department of Physics. ‘We design the chemical structures of the DNA strands to control how they interact with each other. The shuttles can be used to either carry cargo or deliver signals to tell other shuttles what to do.

‘We first use assemblers to arrange the track into ‘spokes’, triggered by the introduction of ATP. We then send in shuttles with fluorescent green cargo which spread out across the track, covering it evenly. When we add more ATP, the shuttles all cluster in the centre of the track where the spokes meet. Next, we send signal shuttles along the tracks to tell the cargo-carrying shuttles to release the fluorescent cargo into the environment, where it disperses. We can also send shuttles programmed with ‘dismantle’ signals to the central hub, telling the tracks to break up.’

This demonstration used fluorescent green dyes as cargo, but the same methods could be applied to other compounds. As well as colour changes, spoke-like track systems could be used to speed up chemical reactions by bringing the necessary compounds together at the central hub. More broadly, using DNA to control motor proteins could enable the development of more sophisticated self-assembling systems for a wide variety of applications.

Here’s a link to and a citation for the paper,

Transport and self-organization across different length scales powered by motor proteins and programmed by DNA by Adam J. M. Wollman, Carlos Sanchez-Cano, Helen M. J. Carstairs, Robert A. Cross, & Andrew J. Turberfield. Nature Nanotechnology (2013) doi:10.1038/nnano.2013.230 Published online 10 November 2013

This article is behind a paywall although you can preview it for free via ReadCube Access.