Tag Archives: Duke University

Silver nanoparticles and wormwood tackle plant-killing fungus

I’m back in Florida (US), so to speak. Last mentioned here in an April 7, 2015 post about citrus canker and zinkicide, a story about a disease which endangers citrus production in the US, this latest story concerns a possible solution to the problem of a fungus, which attacks ornamental horticultural plants in Florida. From a May 5, 2015 news item on Azonano,

Deep in the soil, underneath more than 400 plant and tree species, lurks a lethal fungus threatening Florida’s $15 billion a year ornamental horticulture industry.

But University of Florida plant pathologist G. Shad Ali has found an economical and eco-friendly way to combat the plant destroyer known as phytophthora before it attacks the leaves and roots of everything from tomato plants to oak trees.

Ali and a team of researchers with UF’s Institute of Food and Agricultural Sciences, along with the University of Central Florida and the New Jersey Institute of Technology, have found that silver nanoparticles produced with an extract of wormwood, an herb with strong antioxidant properties, can stop several strains of the deadly fungus.

A May 4, 2015 University of Florida news release, which originated the news item, describes the work in more detail,

“The silver nanoparticles are extremely effective in eliminating the fungus in all stages of its life cycle,” Ali said. “In addition, it has no adverse effects on plant growth.” [emphasis mine]

The silver nanoparticles measure 5 to 100 nanometers in diameter – about one one-thousandth the width of a human hair. Once the nanoparticles are sprayed onto a plant, they shield it from fungus. Since the nanoparticles display multiple ways of inhibiting fungus growth, the chances of pathogens developing resistance to them are minimized, Ali said. Because of that, they may be used for controlling fungicide-resistant plant pathogens more effectively.

That’s good news for the horticulture industry. Worldwide crop losses due to phytophthora fungus diseases are estimated to be in the multibillion dollar range, with $6.7 billion in losses in potato crops due to late blight – the cause of the Irish Potato Famine in the mid-1800s when more than 1 million people died – and $1 billion to $2 billion in soybean loss.

Silver nanoparticles are being investigated for applications in various industries, including medicine, diagnostics, cosmetics and food processing.  They already are used in wound dressings, food packaging and in consumer products such as textiles and footwear for fighting odor-causing microorganisms.

Other members of the UF research team were Mohammad Ali, a visiting doctoral student from the Quaid-i-Azam University, Islamabad, Pakistan; David Norman and Mary Brennan with the University of Florida’s Plant Pathology-Mid Florida Research and Education Center; Bosung Kim with the University of Central Florida’s chemistry department; Kevin Belfield with the College of Science and Liberal Arts at the New Jersey Institute of Technology and the University of Central Florida’s chemistry department.

Ali’s comment about silver nanoparticles not having any adverse effects on plant growth is in contrast to findings by Mark Wiesner and other researchers at  Duke University (North Carolina, US). From my Feb. 28, 2013 posting (which also features a Finnish-Estonia study showing no adverse effects from silver nanoparticles  in crustaceans),

… there’s a study from Duke University suggests that silver nanoparticles in wastewater which is later put to agricultural use may cause problems. From the Feb. 27, 2013 news release on EurekAlert,

In experiments mimicking a natural environment, Duke University researchers have demonstrated that the silver nanoparticles used in many consumer products can have an adverse effect on plants and microorganisms.

The main route by which these particles enter the environment is as a by-product of water and sewage treatment plants. [emphasis] The nanoparticles are too small to be filtered out, so they and other materials end up in the resulting “sludge,” which is then spread on the land surface as a fertilizer.

The researchers found that one of the plants studied, a common annual grass known as Microstegium vimeneum, had 32 percent less biomass in the mesocosms treated with the nanoparticles. Microbes were also affected by the nanoparticles, Colman [Benjamin Colman, a post-doctoral fellow in Duke’s biology department and a member of the Center for the Environmental Implications of Nanotechnology (CEINT)] said. One enzyme associated with helping microbes deal with external stresses was 52 percent less active, while another enzyme that helps regulate processes within the cell was 27 percent less active. The overall biomass of the microbes was also 35 percent lower, he said.

“Our field studies show adverse responses of plants and microorganisms following a single low dose of silver nanoparticles applied by a sewage biosolid,” Colman said. “An estimated 60 percent of the average 5.6 million tons of biosolids produced each year is applied to the land for various reasons, and this practice represents an important and understudied route of exposure of natural ecosystems to engineered nanoparticles.”

“Our results show that silver nanoparticles in the biosolids, added at concentrations that would be expected, caused ecosystem-level impacts,” Colman said. “Specifically, the nanoparticles led to an increase in nitrous oxide fluxes, changes in microbial community composition, biomass, and extracellular enzyme activity, as well as species-specific effects on the above-ground vegetation.”

Getting back to Florida, you can find Ali’s abstract here,

Inhibition of Phytophthora parasitica and P. capsici by silver nanoparticles synthesized using aqueous extract of Artemisia absinthium by Mohammad Ali, Bosung Kim, Kevin Belfield, David J. Norman, Mary Brennan, & Gul Shad Ali. Phytopathology  http://dx.doi.org/10.1094/PHYTO-01-15-0006-R Published online April 14, 2015

This paper is behind a paywall.

For anyone who recognized that wormwood is a constituent of Absinthe, a liquor that is banned in many parts of the world due to possible side effects associated with the wormwood, here’s more about it from the Wormwood overview page on WebMD (Note: Links have been removed),

Wormwood is an herb. The above-ground plant parts and oil are used for medicine.

Wormwood is used in some alcoholic beverages. Vermouth, for example, is a wine beverage flavored with extracts of wormwood. Absinthe is another well-known alcoholic beverage made with wormwood. It is an emerald-green alcoholic drink that is prepared from wormwood oil, often along with other dried herbs such as anise and fennel. Absinthe was popularized by famous artists and writers such as Toulouse-Lautrec, Degas, Manet, van Gogh, Picasso, Hemingway, and Oscar Wilde. It is now banned in many countries, including the U.S. But it is still allowed in European Union countries as long as the thujone content is less than 35 mg/kg. Thujone is a potentially poisonous chemical found in wormwood. Distilling wormwood in alcohol increases the thujone concentration.

Returning to the matter at hand, as I’ve noted previously elsewhere, research into the toxic effects associated with nanomaterials (e.g. silver nanoparticles) is a complex process.

Of airborne nanomaterials, bacterial microbiomes, viral microbiomes, and paper sensors

There’s a Jan. 14, 2015 news item on Nanowerk from the Virginia Polytechnic Institute (Virginia Tech) which is largely a personal profile featuring some basic information (useful for those new to the topic) about airborne nanoparticles (Note: A link has been removed),

The Harvard educated undergraduate [Linsey Marr,  professor of civil and environmental engineering, Virginia Tech] who obtained her Ph.D. from University of California at Berkeley and trained as a postdoctoral researcher with a Nobel laureate of chemistry at MIT is now among a handful of researchers in the world who are addressing concerns about engineered nanomaterials in the atmosphere.

Marr is part of the National Science Foundation’s Center for the Environmental Implications of Nanotechnology and her research group has characterized airborne nanoparticles at every point of their life cycle. This cycle includes production at a commercial manufacturing facility, use by consumers in the home, and disposal via incineration.

A Jan. 14, 2015 Virginia Tech news release, which originated the news item, quotes Marr on the current thinking about airborne nanoparticles,

“Results have shown that engineered nanomaterials released into the air are often aggregated with other particulate matter, such as combustion soot or ingredients in consumer spray products, and that the size of such aggregates may range from smaller than 10 nanometers to larger than 10 microns,” Marr revealed. She was referring to studies completed by research group members Marina Quadros Vance of Florianopolis, Brazil, a research scientist with the Virginia Tech Institute of Critical Technology and Applied Science, and Eric Vejerano, of Ligao, Philippines, a post-doctoral associate in civil and environmental engineering.

Size matters if these aggregates are inhaled.

Another concern is the reaction of a nanomaterial such as a fullerene with ozone at environmentally relevant concentration levels. Marr’s graduate student, Andrea Tiwari, of Mankato, Minnesota, said the resulting changes in fullerene could lead to enhanced toxicity.

The story then segues into airborne pathogens and viruses eventually honing in on virus microbiomes and bacterial microbiomes (from the news release),

Marr is a former Ironman triathlete who obviously has strong interests in what she is breathing into her own body. So it would be natural for her to expand her study of engineered nanoparticles traveling in the atmosphere to focus on airborne pathogens.

She did so by starting to consider the influenza virus as an airborne pollutant. She applied the same concepts and tools used for studying environmental contaminants and ambient aerosols to the examination of the virus.

She looked at viruses as “essentially self-assembled nanoparticles that are capable of self-replication.”

Her research team became the first to measure influenza virus concentrations in ambient air in a children’s day care center and on airplanes. When they conducted their studies, the Virginia Tech researchers collected samples from a waiting room of a health care center, two toddlers’ rooms and one babies’ area of a childcare center, as well as three cross-country flights between Roanoke, Virginia., and San Francisco. They collected 16 samples between Dec. 10, 2009 and Apr. 22, 2010.

“Half of the samples were confirmed to contain aerosolized influenza A viruses,” Marr said. The childcare samples were the most infected at 75 percent. Next, airplane samples reached 67 percent contamination, and health center numbers came in at 33 percent.

This study serves as a foundation for new work started about a year ago in her lab.

Marr collaborated with Aaron J. Prussin II, of Blacksburg, Virginia, and they successfully secured for him a postdoctoral fellowship from the Alfred P. Sloan Foundation to characterize the bacterial and viral microbiome — the ecological community of microorganisms — of the air in a daycare center.

They are now attempting to determine seasonal changes of both the viral microbiome and the bacterial microbiome in a daycare setting, and examine how changes in the microbiome are related to naturally occurring changes in the indoor environment.

“Little is known about the viral component of the microbiome and it is important because viruses are approximately 10 times more abundant than bacteria, and they help shape the bacterial community. Research suggests that viruses do have both beneficial and harmful interactions with bacteria,” Prussin said.

With Prussin and Marr working together they hope to verify their hypothesis that daycare centers harbor unique, dynamic microbiomes with plentiful bacteria and viruses. They are also looking at what seasonal changes might bring to a daycare setting.

They pointed to the effect of seasonal changes because in previous work, Marr, her former graduate student Wan Yang, of Shantou, China, and Elankumaran Subbiah, a virologist in the biomedical sciences and pathobiology department of the Virginia-Maryland College of Veterinary Medicine, measured the influenza A virus survival rate at various levels of humidity.

Their 2012 study presented for the first time the relationship between the influenza A virus viability in human mucus and humidity over a large range of relative humidities, from 17 percent to 100 percent. They found the viability of the virus was highest when the relative humidity was either close to 100 percent or below 50 percent. The results in human mucus may help explain influenza’s seasonality in different regions.

According to the news release Marr and her colleagues have developed a fast and cheap technology for detection of airborne pathogens (Note: A link has been removed),

With the urgent need to understand the dynamics of airborne pathogens, especially as one considers the threats of bioterrorism, pandemic influenza, and other emerging infectious diseases, Marr said “a breakthrough technology is required to enable rapid, low-cost detection of pathogens in air.”

Along with Subbiah and Peter Vikesland,  professor of civil and environmental engineering, they want to develop readily deployable, inexpensive, paper-based sensors for airborne pathogen detection.

In 2013 they received funding of almost $250,000 from Virginia Tech’s Institute for Critical Technology and Applied Science, a supporter of the clustering of research groups, to support their idea of creating paper-based sensors based on their various successes to date.

Marr explained the sensors “would use a sandwich approach. The bottom layer is paper containing specialized DNA that will immobilize the virus. The middle layer is the virus, which sticks to the specialized DNA on the bottom layer. The top layer is additional specialized DNA that sticks to the virus. This DNA is attached to gold nanoparticles that are easily detectable using a technique known as Raman microscopy.”

They key to their approach is that it combines high-tech with low-tech in the hopes of keeping the assay costs low. Their sampling method will use a bicycle pump, and low cost paper substrates. They hope that they will be able to incorporate smart-phone based signal transduction for the detection. Using this approach, they believe “even remote corners of the world” would be able to use the technique.

Vikesland previously received funding from the Gates Foundation to detect the polio virus via paper-based diagnostics. Polio is still found in countries on the continents of Asia and Africa.

I have previously mentioned Linsey Marr in an Oct. 18, 2013 post about the revival of the Nanotechnology Consumer Products Inventory (originally developed by the Project for Emerging Nanotechnologies) by academics at Virginia Tech and first mentioned CEINT in an Aug. 15, 2011 post about a special project featuring a mesocosm at Duke University (North Carolina).

Carbon nanotube accumulation in Duke University’s (US) mesocosm

This Oct. 1, 2014 news item on ScienceDaily about carbon nanotubes accumulating in the wetlands is carefully worded,

A Duke University team has found that nanoparticles called single-walled carbon nanotubes accumulate quickly in the bottom sediments of an experimental wetland setting, an action they say could indirectly damage the aquatic food chain. [emphasis mine]

The results indicate little risk to humans ingesting the particles through drinking water, say scientists at Duke’s Center for the Environmental Implications of Nanotechnology (CEINT). But the researchers warn that, based on their previous research, the tendency for the nanotubes to accumulate in sediment could indirectly damage the aquatic food chain in the long term if the nanoparticles provide “Trojan horse” piggyback rides to other harmful molecules. [emphases mine]

There’s a lot of hedging (could, if) in the way this research is being described. I imagine the researchers are indicating they have concerns but have no wish to stimulate panic and worry.

An Oct. 1, 2014 Duke University news release (also on EurekAlert), which originated the news item, goes on to explain the interest in carbon nanotubes specifically,

Carbon nanotubes are rapidly becoming more common because of their usefulness in nanoelectric devices, composite materials and biomedicine.

The Duke study was done using small-scale replications of a wetland environment, called “mesocosms,” that include soil, sediments, microbes, insects, plants and fish. These ecosystems-in-a-box are “semi-closed,” meaning they get fresh air and rainwater but don’t drain to their surroundings. While not perfect representations of a natural environment, mesocosms provide a reasonable compromise between the laboratory and the real world.

“The wetland mesocosms we used are a much closer approximation of the natural processes constantly churning in the environment,” said Lee Ferguson, associate professor of civil and environmental engineering at Duke. “Although it’s impossible to know if our results are fully accurate to natural ecosystems, it is clear that the processes we’ve seen should be considered by regulators and manufacturers.”

Ferguson and his colleagues dosed the mesocosms with single-walled carbon nanotubes and measured their concentrations in the water, soil and living organisms during the course of a year. They found that the vast majority of the nanoparticles quickly accumulated in the sediment on the “pond” floor. However, they found no sign of nanoparticle buildup in any plants, insects or fish living in the mesocosms.

That sounds marvelous and then the researchers provide a few facts about carbon nanotubes,

While this is good news for humans or other animals drinking water after a potential spill or other contamination event, the accumulation in sediment does pose concerns for both sediment-dwelling organisms and the animals that eat them. Previous research has shown that carbon nanotubes take a long time to degrade through natural processes — if they do at all — and any chemical that binds to them cannot easily be degraded either.

“These nanoparticles are really good at latching onto other molecules, including many known organic contaminants,” said Ferguson. “Coupled with their quick accumulation in sediment, this may allow problematic chemicals to linger instead of degrading. The nanoparticle-pollutant package could then be eaten by sediment-dwelling organisms in a sort of ‘Trojan horse’ effect, allowing the adsorbed contaminants to accumulate up the food chain.

“The big question is whether or not these pollutants can be stripped away from the carbon nanotubes by these animals’ digestive systems after being ingested,” continued Ferguson. “That’s a question we’re working to answer now.”

It’s good to see this research is being followed up so quickly. I will keep an eye out for it and, in the meantime, wonder how the followup research will be conducted and what animals will be used for the tests.

Here’s a link to and a citation for the researchers’ most recent paper on possible ‘Trojan’ carbon nanotubes,

Fate of single walled carbon nanotubes in wetland ecosystems by Ariette Schierz, Benjamin Espinasse, Mark R. Wiesner, Joseph H. Bisesi, Tara Sabo-Attwood, and P. Lee Ferguson. Environ. Sci.: Nano, 2014, Advance Article DOI: 10.1039/C4EN00063C First published online 03 Sep 2014

This is an open access paper.

I have written about Duke University and its nanoparticle research in mesocosms before. Most recently, there was a Feb. 28, 2013 posting about work on silver nanoparticles which mentions research in the ‘mesocosm’ (scroll down about 50% of the way). There’s also an Aug. 15, 2011 posting which describes the ‘mesocosm’ project at some length.

For anyone unfamiliar with the Trojan horse story (from its Wikipedia entry; Note: Links have been removed),

The Trojan Horse is a tale from the Trojan War about the subterfuge that the Greeks used to enter the city of Troy and win the war. In the canonical version, after a fruitless 10-year siege, the Greeks constructed a huge wooden horse, and hid a select force of men inside. The Greeks pretended to sail away, and the Trojans pulled the horse into their city as a victory trophy. That night the Greek force crept out of the horse and opened the gates for the rest of the Greek army, which had sailed back under cover of night. The Greeks entered and destroyed the city of Troy, decisively ending the war.

World’s largest DNA origami: 200nm x 300nm

If the 200nm x 300nm size is the world’s largest DNA origami, what is the standard size?  Before you get the answer to that question, here’s more about the world’s largest from a Sept. 11, 2014 news item on Nanowerk,

Researchers from North Carolina State University, Duke University and the University of Copenhagen have created the world’s largest DNA origami, which are nanoscale constructions with applications ranging from biomedical research to nanoelectronics.

“These origami can be customized for use in everything from studying cell behavior to creating templates for the nanofabrication of electronic components,” says Dr. Thom LaBean, an associate professor of materials science and engineering at NC State and senior author of a paper describing the work …

A Sept. ?, 2014 North Carolina State University (NCSU) news release, which originated the news item, describes DNA origami and the process for creating it,

DNA origami are self-assembling biochemical structures that are made up of two types of DNA. To make DNA origami, researchers begin with a biologically derived strand of DNA called the scaffold strand. The researchers then design customized synthetic strands of DNA, called staple strands. Each staple strand is made up of a specific sequence of bases (adenine, cytosine, thaline and guanine – the building blocks of DNA), which is designed to pair with specific subsequences on the scaffold strand.

The staple strands are introduced into a solution containing the scaffold strand, and the solution is then heated and cooled. During this process, each staple strand attaches to specific sections of the scaffold strand, pulling those sections together and folding the scaffold strand into a specific shape.

Here’s the answer to the question I asked earlier about the standard size for DNA origami and a description for how the researchers approached the problem of making a bigger piece (from the news release,

The standard for DNA origami has long been limited to a scaffold strand that is made up of 7,249 bases, creating structures that measure roughly 70 nanometers (nm) by 90 nm, though the shapes may vary.

However, the research team led by LaBean has now created DNA origami consisting of 51,466 bases, measuring approximately 200 nm by 300 nm.

“We had to do two things to make this viable,” says Dr. Alexandria Marchi, lead author of the paper and a postdoctoral researcher at Duke. “First we had to develop a custom scaffold strand that contained 51 kilobases. We did that with the help of molecular biologist Stanley Brown at the University of Copenhagen.

“Second, in order to make this economically feasible, we had to find a cost-effective way of synthesizing staple strands – because we went from needing 220 staple strands to needing more than 1,600,” Marchi says.

The researchers did this by using what is essentially a converted inkjet printer to synthesize DNA directly onto a plastic chip.

“The technique we used not only creates large DNA origami, but has a fairly uniform output,” LaBean says. “More than 90 percent of the origami are self-assembling properly.”

For the curious, a link to and a citation for the paper,

Toward Larger DNA Origami by Alexandria N. Marchi, Ishtiaq Saaem, Briana N. Vogen, Stanley Brown, and Thomas H. LaBean. Nano Lett., Article ASAP DOI: 10.1021/nl502626s Publication Date (Web): September 1, 2014
Copyright © 2014 American Chemical Society

This paper is behind a paywall.

Brazil, the 2014 World Cup kickoff, and a mind-controlled exoskeleton (part four of five)

The Brain research, ethics, and nanotechnology (part one of five) May 19, 2014 post kicked off a series titled ‘Brains, prostheses, nanotechnology, and human enhancement’ which brings together a number of developments in the worlds of neuroscience, prosthetics, and, incidentally, nanotechnology in the field of interest called human enhancement. Parts one through four are an attempt to draw together a number of new developments, mostly in the US and in Europe. Due to my language skills which extend to English and, more tenuously, French, I can’t provide a more ‘global perspective’. Part five features a summary.

Brazil’s World Cup for soccer/football which opens on June 12, 2014 will be the first public viewing of someone with paraplegia demonstrating a mind-controlled exoskeleton (or a robotic suit as it’s sometimes called) by opening the 2014 games with the first kick-off.

I’ve been covering this story since 2011 and, even so, was late to the party as per this May 7, 2014 article by Alejandra Martins for BBC World news online,

The World Cup curtain-raiser will see the first public demonstration of a mind-controlled exoskeleton that will enable a person with paralysis to walk.

If all goes as planned, the robotic suit will spring to life in front of almost 70,000 spectators and a global audience of billions of people.

The exoskeleton was developed by an international team of scientists as part of the Walk Again Project and is the culmination of more than a decade of work for Dr Miguel Nicolelis, a Brazilian neuroscientist based at Duke University in North Carolina. [emphasis mine]

Since November [2013], Dr Nicolelis has been training eight patients at a lab in Sao Paulo, in the midst of huge media speculation that one of them will stand up from his or her wheelchair and deliver the first kick of this year’s World Cup.

“That was the original plan,” the Duke University researcher told the BBC. “But not even I could tell you the specifics of how the demonstration will take place. This is being discussed at the moment.”

Speaking in Portuguese from Sao Paulo, Miguel Nicolelis explained that all the patients are over 20 years of age, with the oldest about 35.

“We started the training in a virtual environment with a simulator. In the last few days, four patients have donned the exoskeleton to take their first steps and one of them has used mental control to kick a ball,” he explained.

The history of Nicolelis’ work is covered here in a series of a posts starting the with an Oct. 5, 2011 post (Advertising for the 21st Century: B-Reel, ‘storytelling’, and mind control; scroll down 2/3 of the way for a reference to Ed Yong’s article where I first learned of Nicolelis).

The work was explored in more depth in a March 16, 2012 posting (Monkeys, mind control, robots, prosthetics, and the 2014 World Cup (soccer/football) and then followed up a year later by two posts which link Nicoleliis’ work with the Brain Activity Map (now called, BRAIN [Brain Research through Advancing Innovative Neurotechnologies] initiative: a March 4, 2013 (Brain-to-brain communication, organic computers, and BAM [brain activity map], the connectome) and a March 8,  2013 post (Prosthetics and the human brain) directly linking exoskeleton work in Holland and the project at Duke with current brain research and the dawning of a new relationship to one’s prosthestics,

On the heels of research which suggests that humans tend to view their prostheses, including wheel chairs, as part of their bodies, researchers in Europe  have announced the development of a working exoskeleton powered by the wearer’s thoughts.

Getting back to Brazil and Nicolelis’ technology, Ian Sample offers an excellent description in an April 1, 2014 article for the Guardian (Note: Links have been removed),

The technology in question is a mind-controlled robotic exoskeleton. The complex and conspicuous robotic suit, built from lightweight alloys and powered by hydraulics, has a simple enough function. When a paraplegic person straps themselves in, the machine does the job that their leg muscles no longer can.

The exoskeleton is the culmination of years of work by an international team of scientists and engineers on the Walk Again project. The robotics work was coordinated by Gordon Cheng at the Technical University in Munich, and French researchers built the exoskeleton. Nicolelis’s team focused on ways to read people’s brain waves, and use those signals to control robotic limbs.

To operate the exoskeleton, the person is helped into the suit and given a cap to wear that is fitted with electrodes to pick up their brain waves. These signals are passed to a computer worn in a backpack, where they are decoded and used to move hydraulic drivers on the suit.

The exoskeleton is powered by a battery – also carried in the backpack – that allows for two hours of continuous use.

“The movements are very smooth,” Nicolelis told the Guardian. “They are human movements, not robotic movements.”

Nicolelis says that in trials so far, his patients seem have taken to the exoskeleton. “This thing was made for me,” one patient told him after being strapped into the suit.

The operator’s feet rest on plates which have sensors to detect when contact is made with the ground. With each footfall, a signal shoots up to a vibrating device sewn into the forearm of the wearer’s shirt. The device seems to fool the brain into thinking that the sensation came from their foot. In virtual reality simulations, patients felt that their legs were moving and touching something.

Sample’s article includes a good schematic of the ‘suit’ which I have not been able to find elsewhere (meaning the Guardian likely has a copyright for the schematic and is why you won’t see it here) and speculation about robotics and prosthetics in the future.

Nicolelis and his team have a Facebook page for the Walk Again Project where you can get some of the latest information with  both English and Portuguese language entries as they prepare for the June 12, 2014 kickoff.

One final thought, this kickoff project represents an unlikely confluence of events. After all, what are the odds

    • that a Brazil-born researcher (Nicolelis) would be working on a project to give paraplegics the ability to walk again? and
    • that Brazil would host the World Cup in 2014 (the first time since 1950)? and
    • that the timing would coincide so a public demonstration at one of the world’s largest athletic events (of a sport particularly loved in Brazil) could be planned?

It becomes even more extraordinary when one considers that Brazil had isolated itself somewhat in the 1980s with a policy of nationalism vis à vis the computer industry (from the Brazil Science and Technology webpage on the ITA website),

In the early 1980s, the policy of technological nationalism and self-sufficiency had narrowed to the computer sector, where protective legislation tried to shield the Brazilian mini- and microcomputer industries from foreign competition. Here again, the policy allowed for the growth of local industry and a few well-qualified firms, but the effect on the productive capabilities of the economy as a whole was negative; and the inability to follow the international market in price and quality forced the policy to be discontinued.

For those who may have forgotten, the growth of the computer industry (specifically personal computers) in the 1980s figured hugely in a country’s economic health and, in this case,with  a big negative impact in Brazil.

Returning to 2014, the kickoff in Brazil (if successful) symbolizes more than an international athletic competition or a technical/medical achievement, this kick-off symbolizes a technological future for Brazil and its place on the world stage (despite the protests and social unrest) .

Links to other posts in the Brains, prostheses, nanotechnology, and human enhancement five-part series

Part one: Brain research, ethics, and nanotechnology (May 19, 2014 post)

Part two: BRAIN and ethics in the US with some Canucks (not the hockey team) participating (May 19, 2014)

Part three: Gray Matters: Integrative Approaches for Neuroscience, Ethics, and Society issued May 2014 by US Presidential Bioethics Commission (May 20, 2014)

Part five: Brains, prostheses, nanotechnology, and human enhancement: summary (May 20, 2014)

ETA June 16, 2014: The kickoff seems to have been a disappointment (June 15, 2014 news item on phys.org) and for those who might be interested in some of the reasons for the World Cup unrest and protests in Brazil, John Oliver provides an excoriating overview of the organization which organizes the World Cup games while professing his great love of the games, http://www.youtube.com/watch?v=DlJEt2KU33I

The glassy side of fractals

An April 24, 2014 news item on Nanowerk highlights a breakthrough in glass (wordplay intended),

Colorful church windows, beads on a necklace and many of our favorite plastics share something in common — they all belong to a state of matter known as glasses. School children learn the difference between liquids and gases, but centuries of scholarship have failed to produce consensus about how to categorize glass.

Now, combining theory and numerical simulations, researchers have resolved an enduring question in the theory of glasses by showing that their energy landscapes are far rougher than previously believed.

An April 23, 2014 Duke University news release by Erin Weeks (also on EurekAlert), which originated the news item, provides a diagram (am I the only one who thinks these resemble cow udders?) and more infotmation,

Glasses form when their molecules get jammed into fractal "wells," as shown on the right, rather than smooth or slightly rough wells (left). Photo credit: Patrick Charbonneau. Courtesy: Duke University

Glasses form when their molecules get jammed into fractal “wells,” as shown on the right, rather than smooth or slightly rough wells (left). Photo credit: Patrick Charbonneau. Courtesy: Duke University

“There have been beautiful mathematical models, but with sometimes tenuous connection to real, structural glasses. Now we have a model that’s much closer to real glasses,” said Patrick Charbonneau, one of the co-authors and assistant professor of chemistry and physics at Duke University.

One thing that sets glasses apart from other phase transitions is a lack of order among their constituent molecules. Their cooled particles become increasingly sluggish until, caged in by their neighbors, the molecules cease to move — but in no predictable arrangement. One way for researchers to visualize this is with an energy landscape, a map of all the possible configurations of the molecules in a system.

Charbonneau [Patrick Charbonneau, one of the co-authors and assistant professor of chemistry and physics at Duke University] said a simple energy landscape of glasses can be imagined as a series of ponds or wells. When the water is high (the temperature is warmer), the particles within float around as they please, crossing from pond to pond without problem. But as you begin to lower the water level (by lowering the temperature or increasing the density), the particles become trapped in one of the small ponds. Eventually, as the pond empties, the molecules become jammed into disordered and rigid configurations.

“Jamming is what happens when you take sand and squeeze it,” Charbonneau said. “First it’s easy to squeeze, and then after a while it gets very hard, and eventually it becomes impossible.”

Like the patterns of a lakebed revealed by drought, researchers have long wondered exactly what “shape” lies at the bottom of glass energy landscapes, where molecules jam. Previous theories have predicted the bottom of the basins might be smooth or a bit rough.

“At the bottom of these lakes or wells, what you find is variation in which particles have a force contact or bond,” Charbonneau said. “So even though you start from a single configuration, as you go to the bottom or compress them, you get different realizations of which pairs of particles are actually in contact.”

Charbonneau and his co-authors based in Paris and Rome showed, using computer simulations and numeric computations, that the glass molecules jam based on a fractal regime of wells within wells.

The new description makes sense of several behaviors seen in glasses, like the property known as avalanching, which describes a random rearrangement of molecules that leads to crystallization.

Understanding the structure of glasses is more than an intellectual exercise — materials scientists stand to advance from the knowledge, which could lead to better control of the aging of glasses.

Here’s a link to and a citation for the paper,

Fractal free energy landscapes in structural glasses by Patrick Charbonneau, Jorge Kurchan,     Giorgio Parisi, Pierfrancesco Urbani & Francesco Zamponi. Nature Communications 5, Article number: 3725 doi:10.1038/ncomms4725 Published 24 April 2014

This paper is behind a paywall but there is a free preview available through ReadCube Access.

Nanomaterials and safety: Europe’s non-governmental agencies make recommendations; (US) Arizona State University initiative; and Japan’s voluntary carbon nanotube management

I have three news items which have one thing in common, they concern nanomaterials and safety. Two of these of items are fairly recent; the one about Japan has been sitting in my drafts folder for months and I’m including it here because if I don’t do it now, I never will.

First, there’s an April 7, 2014 news item on Nanowerk (h/t) about European non-governmental agencies (CIEL; the Center for International Environmental Law and its partners) and their recommendations regarding nanomaterials and safety. From the CIEL April 2014 news release,

CIEL and European partners* publish position paper on the regulation of nanomaterials at a meeting of EU competent authorities

*ClientEarth, The European Environmental Bureau, European citizen’s Organization for Standardisation, The European consumer voice in Standardisation –ANEC, and Health Care Without Harm, Bureau of European Consumers

… Current EU legislation does not guarantee that all nanomaterials on the market are safe by being assessed separately from the bulk form of the substance. Therefore, we ask the European Commission to come forward with concrete proposals for a comprehensive revision of the existing legal framework addressing the potential risks of nanomaterials.

1. Nanomaterials are different from other substances.

We are concerned that EU law does not take account of the fact that nano forms of a substance are different and have different intrinsic properties from their bulk counterpart. Therefore, we call for this principle to be explicitly established in the REACH, and Classification Labeling and Packaging (CLP) regulations, as well as in all other relevant legislation. To ensure adequate consideration, the submission of comprehensive substance identity and characterization data for all nanomaterials on the market, as defined by the Commission’s proposal for a nanomaterial definition, should be required.

Similarly, we call on the European Commission and EU Member States to ensure that nanomaterials do not benefit from the delays granted under REACH to phase-in substances, on the basis of information collected on their bulk form.

Further, nanomaterials, due to their properties, are generally much more reactive than their bulk counterpart, thereby increasing the risk of harmful impact of nanomaterials compared to an equivalent mass of bulk material. Therefore, the present REACH thresholds for the registration of nanomaterials should be lowered.

Before 2018, all nanomaterials on the market produced in amounts of over 10kg/year must be registered with ECHA on the basis of a full registration dossier specific to the nanoform.

2. Risk from nanomaterials must be assessed

Six years after the entry into force of the REACH registration requirements, only nine substances have been registered as nanomaterials despite the much wider number of substances already on the EU market, as demonstrated by existing inventories. Furthermore, the poor quality of those few nano registration dossiers does not enable their risks to be properly assessed. To confirm the conclusions of the Commission’s nano regulatory review assuming that not all nanomaterials are toxic, relevant EU legislation should be amended to ensure that all nanomaterials are adequately assessed for their hazardous properties.

Given the concerns about novel properties of nanomaterials, under REACH, all registration dossiers of nanomaterials must include a chemical safety assessment and must comply with the same information submission requirements currently required for substances classified as Carcinogenic, Mutagenic or Reprotoxic (CMRs).

3. Nanomaterials should be thoroughly evaluated

Pending the thorough risk assessment of nanomaterials demonstrated by comprehensive and up-to-date registration dossiers for all nanoforms on the market, we call on ECHA to systematically check compliance for all nanoforms, as well as check the compliance of all dossiers which, due to uncertainties in the description of their identity and characterization, are suspected of including substances in the nanoform. Further, the Community Roling Action Plan (CoRAP) list should include all identified substances in the nanoform and evaluation should be carried out without delay.

4. Information on nanomaterials must be collected and disseminated

All EU citizens have the right to know which products contain nanomaterials as well as the right to know about their risks to health and environment and overall level of exposure. Given the uncertainties surrounding nanomaterials, the Commission must guarantee that members of the public are in a position to exercise their right to know and to make informed choices pending thorough risk assessments of nanomaterials on the market.

Therefore, a publicly accessible inventory of nanomaterials and consumer products containing nanomaterials must be established at European level. Moreover, specific nano-labelling or declaration requirements must be established for all nano-containing products (detergents, aerosols, sprays, paints, medical devices, etc.) in addition to those applicable to food, cosmetics and biocides which are required under existing obligations.

5. REACH enforcement activities should tackle nanomaterials

REACH’s fundamental principle of “no data, no market” should be thoroughly implemented. Therefore, nanomaterials that are on the market without a meaningful minimum set of data to allow the assessment of their hazards and risks should be denied market access through enforcement activities. In the meantime, we ask the EU Member States and manufacturers to use a precautionary approach in the assessment, production, use and disposal of nanomaterials

This comes on the heels of CIEL’s March 2014 news release announcing a new three-year joint project concerning nanomaterials and safety and responsible development,

Supported by the VELUX foundations, CIEL and ECOS (the European Citizen’s Organization for Standardization) are launching a three-year project aiming to ensure that risk assessment methodologies and risk management tools help guide regulators towards the adoption of a precaution-based regulatory framework for the responsible development of nanomaterials in the EU and beyond.

Together with our project partner the German Öko-Institut, CIEL and ECOS will participate in the work of the standardization organizations Comité Européen de Normalisation and International Standards Organization, and this work of the OECD [Organization for Economic Cooperation and Development], especially related to health, environmental and safety aspects of nanomaterials and exposure and risk assessment. We will translate progress into understandable information and issue policy recommendations to guide regulators and support environmental NGOs in their campaigns for the safe and sustainable production and use of nanomaterials.

The VILLUM FOUNDATION and the VELUX FOUNDATION are non-profit foundations created by Villum Kann Rasmussen, the founder of the VELUX Group and other entities in the VKR Group, whose mission it is to bring daylight, fresh air and a better environment into people’s everyday lives.

Meanwhile in the US, an April 6, 2014 news item on Nanowerk announces a new research network, based at Arizona State University (ASU), devoted to studying health and environmental risks of nanomaterials,

Arizona State University researchers will lead a multi-university project to aid industry in understanding and predicting the potential health and environmental risks from nanomaterials.

Nanoparticles, which are approximately 1 to 100 nanometers in size, are used in an increasing number of consumer products to provide texture, resiliency and, in some cases, antibacterial protection.

The U.S. Environmental Protection Agency (EPA) has awarded a grant of $5 million over the next four years to support the LCnano Network as part of the Life Cycle of Nanomaterials project, which will focus on helping to ensure the safety of nanomaterials throughout their life cycles – from the manufacture to the use and disposal of the products that contain these engineered materials.

An April 1, 2014 ASU news release, which originated the news item, provides more details and includes information about project partners which I’m happy to note include nanoHUB and the Nanoscale Informal Science Education Network (NISENet) in addition to the other universities,

Paul Westerhoff is the LCnano Network director, as well as the associate dean of research for ASU’s Ira A. Fulton Schools of Engineering and a professor in the School of Sustainable Engineering and the Built Environment.

The project will team engineers, chemists, toxicologists and social scientists from ASU, Johns Hopkins, Duke, Carnegie Mellon, Purdue, Yale, Oregon’s state universities, the Colorado School of Mines and the University of Illinois-Chicago.

Engineered nanomaterials of silver, titanium, silica and carbon are among the most commonly used. They are dispersed in common liquids and food products, embedded in the polymers from which many products are made and attached to textiles, including clothing.

Nanomaterials provide clear benefits for many products, Westerhoff says, but there remains “a big knowledge gap” about how, or if, nanomaterials are released from consumer products into the environment as they move through their life cycles, eventually ending up in soils and water systems.

“We hope to help industry make sure that the kinds of products that engineered nanomaterials enable them to create are safe for the environment,” Westerhoff says.

“We will develop molecular-level fundamental theories to ensure the manufacturing processes for these products is safer,” he explains, “and provide databases of measurements of the properties and behavior of nanomaterials before, during and after their use in consumer products.”

Among the bigger questions the LCnano Network will investigate are whether nanomaterials can become toxic through exposure to other materials or the biological environs they come in contact with over the course of their life cycles, Westerhoff says.

The researchers will collaborate with industry – both large and small companies – and government laboratories to find ways of reducing such uncertainties.

Among the objectives is to provide a framework for product design and manufacturing that preserves the commercial value of the products using nanomaterials, but minimizes potentially adverse environmental and health hazards.

In pursuing that goal, the network team will also be developing technologies to better detect and predict potential nanomaterial impacts.

Beyond that, the LCnano Network also plans to increase awareness about efforts to protect public safety as engineered nanomaterials in products become more prevalent.

The grant will enable the project team to develop educational programs, including a museum exhibit about nanomaterials based on the LCnano Network project. The exhibit will be deployed through a partnership with the Arizona Science Center and researchers who have worked with the Nanoscale Informal Science Education Network.

The team also plans to make information about its research progress available on the nanotechnology industry website Nanohub.org.

“We hope to use Nanohub both as an internal virtual networking tool for the research team, and as a portal to post the outcomes and products of our research for public access,” Westerhoff says.

The grant will also support the participation of graduate students in the Science Outside the Lab program, which educates students on how science and engineering research can help shape public policy.

Other ASU faculty members involved in the LCnano Network project are:

• Pierre Herckes, associate professor, Department of Chemistry and Biochemistry, College of Liberal Arts and Sciences
• Kiril Hristovski, assistant professor, Department of Engineering, College of Technology and Innovation
• Thomas Seager, associate professor, School of Sustainable Engineering and the Built Environment
• David Guston, professor and director, Consortium for Science, Policy and Outcomes
• Ira Bennett, assistant research professor, Consortium for Science, Policy and Outcomes
• Jameson Wetmore, associate professor, Consortium for Science, Policy and Outcomes, and School of Human Evolution and Social Change

I hope to hear more about the LCnano Network as it progresses.

Finally, there was this Nov. 12, 2013 news item on Nanowerk about instituting  voluntary safety protocols for carbon nanotubes in Japan,

Technology Research Association for Single Wall Carbon Nanotubes (TASC)—a consortium of nine companies and the National Institute of Advanced Industrial Science and Technology (AIST) — is developing voluntary safety management techniques for carbon nanotubes (CNTs) under the project (no. P10024) “Innovative carbon nanotubes composite materials project toward achieving a low-carbon society,” which is sponsored by the New Energy and Industrial Technology Development Organization (NEDO).

Lynn Bergeson’s Nov. 15, 2013 posting on nanotech.lawbc.com provides a few more details abut the TASC/AIST carbon nanotube project (Note: A link has been removed),

Japan’s National Institute of Advanced Industrial Science and Technology (AIST) announced in October 2013 a voluntary guidance document on measuring airborne carbon nanotubes (CNT) in workplaces. … The guidance summarizes the available practical methods for measuring airborne CNTs:  (1) on-line aerosol measurement; (2) off-line quantitative analysis (e.g., thermal carbon analysis); and (3) sample collection for electron microscope observation. …

You can  download two protocol documents (Guide to measuring airborne carbon nanotubes in workplaces and/or The protocols of preparation, characterization and in vitro cell based assays for safety testing of carbon nanotubes), another has been published since Nov. 2013, from the AIST’s Developing voluntary safety management techniques for carbon nanotubes (CNTs): Protocol and Guide webpage., Both documents are also available in Japanese and you can link to the Japanese language version of the site from the webpage.

Food and nanotechnology (as per Popular Mechanics) and zinc oxide nanoparticles in soil (as per North Dakota State University)

I wouldn’t expect to find an article about food in a magazine titled Popular Mechanics but there it is, a Feb. 19,2014 article by Christina Ortiz (Note: A link has been removed),

For a little more than a decade, the food industry has been using nanotechnology to change the way we grow and maintain our food. The grocery chain Albertsons currently has a list of nanotech-touched foods in its home brand, ranging from cookies to cheese blends.

Nanotechnology use in food has real advantages: The technology gives producers the power to control how food looks, tastes, and even how long it lasts.

Looks Good and Good for You?

The most commonly used nanoparticle in foods is titanium dioxide. It’s used to make foods such as yogurt and coconut flakes look as white as possible, provide opacity to other food colorings, and prevent ingredients from caking up. Nanotech isn’t just about aesthetics, however. The biggest potential use for this method involves improving the nutritional value of foods.

Nano additives can enhance or prevent the absorption of certain nutrients. In an email interview with Popular Mechanics, Jonathan Brown, a research fellow at the University of Minnesota, says this method could be used to make mayonnaise less fattening by replacing fat molecules with water droplets.

I did check out US grocer, Albertson’s list of ‘nanofoods’, which they provide and discovered that it’s an undated listing on the Project of Emerging Nanotechnologies’ Consumer Products Inventory (CPI). The inventory has been revived recently after lying moribund for a few years (my Oct. 28, 2013 posting describes the fall and rise) and I believe that this 2013 CPI incarnation includes some oversight and analysis of the claims made, which the earlier version did not include. Given that the Albertson’s list is undated it’s difficult to assess the accuracy of the claims regarding the foodstuffs.

If you haven’t read about nanotechnology and food before, the Ortiz article provides a relatively even-handed primer although it does end on a cautionary note. In any event, it was interesting to get a bit of information about the process of ‘nanofood’ regulation in the US and other jurisdictions (from the Ortiz article),

Aside from requiring manufacturers to provide proof that nanotechnology foods are safe, the FDA has yet to implement specific testing of its own. But many countries are researching ways to balance innovation and regulation in this market. In 2012 the European Food Safety Authority (EFSA) released an annual risk assessment report outlining how the European Union is addressing the issue of nanotech in food. In Canada the Food Directorate “is taking a case-by-case approach to the safety assessment of food products containing or using nanomaterials.”

I featured the FDA’s efforts regarding regulation and ‘nanofood’ in an April 23, 2012 posting,

It looks to me like this [FDA’s draft guidance for ‘nanofoods’] is an attempt to develop a relationship where the industry players in the food industry to police their nanotechnology initiatives with the onus being on industry to communicate with the regulators in a continuous process, if not at the research stage certainly at the production stage.

At least one of the primary issues with any emerging technology revolves around the question of risk. Do we stop all manufacturing and development of nanotechnology-enabled food products until we’ve done the research? That question assumes that taking any risks is not worth the currently perceived benefits. The corresponding question, do we move forward and hope for the best? does get expressed perhaps not quite so baldly; I have seen material which suggests that research into risks needlessly hampers progress.

After reading on this topic for five or so years, my sense is that most people are prepared to combine the two approaches, i.e., move forward while researching possible risks. The actual conflicts seem to centre around these questions, how quickly do we move forward; how much research do we need; and what is an acceptable level of risk?

On the topic of researching the impact that nanoparticles might have on plants (food or otherwise), a January 24, 2013 North Dakota State University (NDSU) news release highlights a student researcher’s work on soil, plants, and zinc oxide nanoparticles,

NDSU senior Hannah Passolt is working on a project that is venturing into a very young field of research. The study about how crops’ roots absorb a microscopic nutrient might be described as being ahead of the cutting-edge.

In a laboratory of NDSU’s Wet Ecosystem Research Group, in collaboration with plant sciences, Passolt is exploring how two varieties of wheat take up extremely tiny pieces of zinc, called nanoparticles, from the soil.

As a point of reference, the particles Passolt is examining are measured at below 30 nanometers. A nanometer is 1 billionth of a meter.

“It’s the mystery of nanoparticles that is fascinating to me,” explained the zoology major from Fargo. “The behavior of nanoparticles in the environment is largely unknown as it is a very new, exciting science. This type of project has never been done before.”

In Passolt’s research project, plants supplied by NDSU wheat breeders are grown in a hydroponic solution, with different amounts of zinc oxide nanoparticles introduced into the solution.

Compared to naturally occurring zinc, engineered zinc nanoparticles can have very different properties. They can be highly reactive, meaning they can injure cells and tissues, and may cause genetic damage. The plants are carefully observed for any changes in growth rate and appearance. When the plants are harvested, researchers will analyze them for actual zinc content.

“Zinc is essential for a plant’s development. However, in excess, it can be harmful,” Passolt said. “In one of my experiments, we are using low and high levels of zinc, and the high concentrations are showing detrimental effects. However, we will have to analyze the plants for zinc concentrations to see if there have been any effects from the zinc nanoparticles.”

Passolt has conducted undergraduate research with the Wet Ecosystem Research Group for the past two years. She said working side-by-side with Donna Jacob, research assistant professor of biological sciences; Marinus Otte; professor of biological sciences; and Mohamed Mergoum, professor of plant sciences, has proven to be challenging, invigorating and rewarding.

“I’ve gained an incredible skill set – my research experience has built upon itself. I’ve gotten to the point where I have a pretty big role in an important study. To me, that is invaluable,” Passolt said. “To put effort into something that goes for the greater good of science is a very important lesson to learn.”

According to Jacob, Passolt volunteered two years ago, and she has since become an important member of the group. She has assisted graduate students and worked on her own small project, the results of which she presented at regional and international scientific conferences. “We offered her this large, complex experiment, and she’s really taken charge,” Jacob said, noting Passolt assisted with the project’s design, handled care of the plants and applied the treatments. When the project is completed, Passolt will publish a peer-reviewed scientific article.

“There is nothing like working on your own experiment to fully understand science,” Jacob said. “Since coming to NDSU in 2006, the Wet Ecosystem Research Group has worked with more than 50 undergraduates, possible only because of significant support from the North Dakota IDeA Networks of Biomedical Research Excellence program, known as INBRE, of the NIH National Center for Research Resources.”

Jacob said seven undergraduate students from the lab have worked on their own research projects and presented their work at conferences. Two articles, so far, have been published by undergraduate co-authors. “I believe the students gain valuable experience and an understanding of what scientists really do during fieldwork and in the laboratory,” Jacob said. “They see it is vastly different from book learning, and that scientists use creativity and ingenuity daily. I hope they come away from their experience with some excitement about research, in addition to a better resume.”

Passolt anticipates the results of her work could be used in a broader view of our ecosystem. She notes zinc nanoparticles are an often-used ingredient in such products as lotions, sunscreens and certain drug delivery systems. “Zinc nanoparticles are being introduced into the environment,” she said. “It gets to plants at some point, so we want to see if zinc nanoparticles have a positive or negative effect, or no effect at all.”

Researching nanoparticles the effects they might have on the environment and on health is a complex process as there are many types of nanoparticles some of which have been engineered and some of which occur naturally, silver nanoparticles being a prime example of both engineered and naturally occurring nanoparticles. (As well, the risks may lie more with interactions between nanomaterials.) For an example of research, which seems similar to the NDSU effort, there’s this open access research article,

Low Concentrations of Silver Nanoparticles in Biosolids Cause Adverse Ecosystem Responses under Realistic Field Scenario by Benjamin P. Colman, Christina L. Arnaout, Sarah Anciaux, Claudia K. Gunsch, Michael F. Hochella Jr, Bojeong Kim, Gregory V. Lowry,  Bonnie M. McGill, Brian C. Reinsch, Curtis J. Richardson, Jason M. Unrine, Justin P. Wright, Liyan Yin, and Emily S. Bernhardt. PLoS ONE 2013; 8 (2): e57189 DOI: 10.1371/journal.pone.0057189

One last comment, the Wet Ecosystem Research Group (WERG) mentioned in the news release about Passolt has an interesting history (from the homepage; Note: Links have been removed),

Marinus Otte and Donna Jacob brought WERG to the Department of Biological Sciences in the Fall of 2006.  Prior to that, the research group had been going strong at University College Dublin, Ireland, since 1992.

The aims for the research group are to train graduate and undergraduate students in scientific research, particularly wetlands, plants, biogeochemistry, watershed ecology and metals in the environment.  WERG research  covers a wide range of scales, from microscopic (e.g. biogeochemical processes in the rhizosphere of plants) to landscape (e.g. chemical and ecological connectivity between prairie potholes across North Dakota).  Regardless of the scale, the central theme is biogeochemistry and the interactions between multiple elements in wet environments.

The group works to collaborate with a variety of researchers, including soil scientists, geologists, environmental engineers, microbiologists, as well as with groups underpinning management of natural resources, such the Minnesota Department of Natural Resources, the Department of Natural Resources of Red Lake Indian Reservation, and the North Dakota Department of Health, Division of Water Quality.

Currently, WERG has several projects, mostly in North Dakota and Minnesota.  Otte and Jacob are also Co-directors of the North Dakota INBRE Metal Analysis Core, providing laboratory facilities and mentoring for researchers in undergraduate colleges throughout the state. Otte and Jacob are also members of the Upper Midwest Aerospace Consortium.

Duke University’s (North Carolina, US) Center for Environmental Implications of NanoTechnology (CEINT) wins $15M grant

A Nov. 13, 2013 news item on Azonano announces that the Center for Environmental Implications of Nanotechnology (CEINT) at Duke University has been awarded $15M,

A pioneering, multi-institution research center headquartered at Duke’s Pratt School of Engineering has just won $15-million grant renewal from the National Science Foundation and the US Environmental Protection Agency to continue learning more about where nanoparticles accumulate, how they interact with other chemicals and how they affect the environment.

Founded in 2008, the Center for Environmental Implications of NanoTechnology (CEINT) has been evaluating the effect of long-term nanomaterial exposure on organisms and ecosystems.

“The previous focus has been on studying simple, uniform nanomaterials in simple environments,” said Mark Wiesner, James L. Meriam Professor of Civil & Environmental Engineering and director of CEINT. “As we look to the next five years, we envision a dramatically different landscape. We will be evaluating more complex nanomaterials in more realistic natural environments such as agricultural lands and water treatment systems where these materials are likely to be found.”

The Nov. 11, 2013 Duke University news release by Karyn Hede, which originated the news item, provides some history and context for CEINT (Note: Links have been removed),

When CEINT formed, little research had been done on how materials manufactured at the nanoscale—about 1/10,000th the diameter of a human hair—enter the environment and whether their size and unique properties render them a new category of environmental risk. For example, nanoparticles can be highly reactive with other chemicals in the environment and had been shown to disrupt activities in living organisms. Indeed, nanosilver is used in clothing precisely because it effectively kills odor-causing bacteria.

To tackle this expansive research agenda, CEINT leadership assembled a multi-institutional research team encompassing expertise in ecosystems biology, chemistry, geology, materials science, computational science, mathematical modeling and other specialties, to complement its engineering expertise. The Center has 29 faculty collaborators, as well as 76 graduate and undergraduate students participating in research. Over its first five years, CEINT has answered some of the most pressing questions about environmental risk and has learned where to focus future research.

The center also pioneered the use of a new test chamber, called a mesocosm, that replicates a small wetland environment. “Over the long term, we want to evaluate how nanoparticles bioaccumulate in complex food webs,” said Emily Bernhardt, an associate professor of biology at Duke and ecosystem ecologist who helped design the simulated ecosystems. “The additional funding will allow us to study the subtle effect of low-dose exposure on ecosystems over time, as well as complex interactions among nanoparticles and other environmental contaminants.”

Looking forward, the investigators at CEINT plan to expand the use of systems modeling and to create a “knowledge commons,” a place to store various kinds of data that can then be analyzed as a whole, said CEINT Executive Director Christine Hendren.

“Our investigators and collaborators are located across the globe,” Hendren added. “We are committed to disseminating information that can be translated into responsible regulatory frameworks and that will be available to compare with results of future research.”

Key findings from CEINT’s first five years include:

Naturally occurring nanomaterials far outnumber engineered particles. CEINT scientist Michael Hochella, a geoscientist at Virginia Tech, inventoried nanoparticles and concluded that natural nanoparticles are found everywhere, from dust in the atmosphere to sea spray to volcanoes. The environmental risks of these natural nanomaterials are difficult to separate from engineered nanomaterials.

Engineered nanoparticles change once they enter the environment. Gregory V. Lowry, deputy director of CEINT and professor at Carnegie Mellon University, Pittsburgh, along with colleagues from the University of Birmingham, U.K. and the University of South Carolina found that the relatively large surface area of nanoparticles makes them highly reactive once they enter the environment. These transformations will alter their movement and toxicity and must be considered when studying nanomaterials. Their review article on this topic was named the best feature article of 2012 by the journal Environmental Science and Technology.

Nanoparticles can be visualized, even in complex environmental samples. A research team led by CEINT investigators Jie Liu, associate professor of chemistry at Duke, and CEINT Director Mark Wiesner showed that more than a dozen types of engineered nanoparticles, including silver, gold, and titanium dioxide, along with carbon nanotubes, can be surveyed using a technique called hyperspectral imaging, which measures light scattering caused by different types of nanoparticles. The new technique, co-developed by postdoctoral researcher Appala Raju Badireddy, is sensitive enough to analyze nanoparticles found in water samples ranging from ultrapurified to wastewater. It will be used in future long-term studies of how nanoparticles move and accumulate in ecological systems.

It is possible to estimate current and future volume of engineered nanomaterials. Understanding the volume of nanomaterials being produced and released into the environment is a crucial factor in risk assessment. CEINT researchers led by Christine Hendren measured the upper- and lower-bound annual U.S. production of five classes of nanomaterials, totaling as much as a combined 40,000 metric tons annually as of 2011.

Silver nanoparticles caused environmental stress in a simulated wetland environment. CEINT has developed  “mesocosms,”  open-air terrarium-like structures that simulate wetland ecosystems that can be evaluated over time. Even low doses of silver nanoparticles used in many consumer products produced about a third less biomass in a mesocosm. The researchers will now  look at how nanomaterials are transferred between organisms in a mesocosm.

I have written about CEINT and its work, including the mesocosm, many times. My August 15, 2011 posting offers an introduction to the CEINT mesocosm.

Saving lives at birth 2013: Round 3 award nominees and their technologies

As I have noted before (most recently in a Feb. 13, 2013 posting) there are at least two Grand Challenges, one is a Bill & Melinda Gates Foundation program and the other, Grand Challenges Canada, is funded by the Canadian government. Both organizations along with the U.S. Agency for International Development (USAID), the Government of Norway, and the U.K’s Department for International Development (DFID) have combined their efforts on maternal health in a partnership, Saving Lives at Birth: A Grand Challenge for Development. 2013 is the third year for this competitive funding program, which attracts entries from around the world.

The organization’s July 31, 2013 news release announces the latest funding nominees,

The Saving Lives at Birth: A Grand Challenge for Development today announced 22 Round 3 award nominees from a pool of 53 finalists – innovators who descended on Washington for three days (DevelopmentXChange) to showcase bold, new ideas to save the lives of mothers and newborns in developing countries with aspirations of international funding to realize their vision.

The award nominees cut across maternal and neonatal health, family planning, nutrition and HIV and they present not only cutting-edge technologies that can be used in resource-poor settings, but innovative approaches to delivering services and the adoption of healthy behaviors. The announcement was made at the closing forum of the DevelopmentXChange by the Saving Lives at Birth partners. The nominees will now enter into final negotiations before awards are issued. [emphasis mine]

If I read this rightly, the nominees do not receive a set amount but negotiate for the money they need to implement and/or develop their ‘solution’. The news release provides more details about the process that applicants undertake when they reach the finalist stage,

The Saving Lives at Birth DevelopmentXChange provided a platform for top global innovators to present their ideas in an open, dynamic marketplace and exchange ideas with development experts and potential funders to help meet the immense challenge of protecting mothers and newborns in the poorest places on earth, during their most vulnerable hours. Other promising ideas will be considered for “incubator awards” to assist innovators in further developing their ideas through dialogue and mentorship.

….

The Saving Lives at Birth DevelopmentXChange featured discussions focused on meeting the needs and realities of women and children in low-resource settings as well as workshops that explored business planning, market research, impact investing, and strategies for scaling their innovations.  The three-day event concluded with a forum featuring Ambassador Susan E. Rice, National Security Advisor; Dr. Rajiv Shah, Administrator, USAID; HRH Princess Sarah Zeid of Jordan; New York Times best-selling author Dan Heath and NASA astronaut Col. Ron Garan (ret.).

Leading into the DevelopmentXChange, existing Saving Lives at Birth grantees participated in a three-day, customized training program – a focal point of the global health Xcelerator.  This eight-month program, offered through a partnership between National Collegiate Inventors and Innovators Alliance (NCIIA), the Lemelson Foundation and USAID, provides grantees the tools and knowledge to scale their ideas and maximize the impact of their innovations.

Here’s the list of nominees who emerged from the process (there is one overtly nanotechnology project listed and I suspect others are also enabled by nanotechnology),

Award nominees of Saving Lives at Birth Round 3 include 4 transition-to-scale grant nominees:

· Africare – Dakar, Senegal: A collaborative community-based technology that integrates community support services with mobile and telemedicine platforms to increase demand for, and access to, quality prenatal care services in Senegal.  More: http://savinglivesatbirth.net/summaries/232

· Epidemiological Research Center in Sexual and Reproductive Health – Guatemala City, Guatemala: An integrated approach to reduce maternal and perinatal mortality in Northern Guatemala through simulation-based training, social marketing campaigns and formal health care system engagement.  More: http://savinglivesatbirth.net/summaries/246

· Massachusetts General Hospital – Boston, MA, USA: A next-generation uterine balloon tamponade (UBT) device to treat postpartum hemorrhage (PPH) in Kenya and South Sudan.  More: http://savinglivesatbirth.net/summaries/255

· The Research Institute at Nationwide Children’s Hospital – Columbus, OH, USA: A low-cost paper-based urine test for early diagnosis of pre-eclampsia to reduce pre-eclampsia morbidity and mortality in resource-limited areas.  http://savinglivesatbirth.net/summaries/275

And 18 seed grant nominees:

· BILIMETRIX SRL – Trieste, Italy: An inexpensive system to rapidly test for markers of hyperbilirubinemia (kernicterus)-an often fatal form of brain damage caused by excessive jaundice- in low resource settings in Nigeria, Egypt, and Indonesia.  More: http://savinglivesatbirth.net/summaries/235

· JustMilk – Dept. of Chemical Engineering, University of Cambridge – Cambridge, UK: A low-cost system that aids the administration of drugs and nutrients to breastfeeding infants via easily disintegrating tablets housed within a modified Nipple Shield Delivery System (NSDS).  http://savinglivesatbirth.net/summaries/241

· The University of Melbourne – Melbourne, Australia: A low-cost, electricity-free oxygen concentrator suitable for providing provisional oxygen for neonates in low-resource settings.  http://savinglivesatbirth.net/summaries/277

· University of Toronto – Toronto, Canada: A spray-encapsulated iron premix that will be attached to tea leaves to reduce rates of iron deficiency of pregnant women in South Asia.  http://savinglivesatbirth.net/summaries/279

· University of Valencia – Valencia, Spain: A rapid point-of-care test strips for early diagnosis of sepsis in pregnancy and childbirth. More: http://savinglivesatbirth.net/summaries/281

· Mbarara University of Science and Technology – Mbarara, Uganda: The Augmented Infant Resuscitator (AIR) which gives instant feedback to healthcare professionals performing newborn resuscitation to reduce neonatal deaths from intrapartum birth asphyxia or prematurity.  http://savinglivesatbirth.net/summaries/256

· Bioceptive, Inc. – New Orleans, LA, USA: A low-cost, reusable, and intuitive intrauterine device (IUD) inserter to make the IUD insertion procedure easier and safer in low-resource settings. http://savinglivesatbirth.net/summaries/236

· Convergent Engineering Inc. – Newberry, FL, USA: An inexpensive, easy-to-use, handheld early-warning system that detects pre-eclampsia 10-12 weeks before the onset symptoms. The system pairs a wrist strap embedded with inexpensive ECG and photoplethysmography sensors with a smart phone for processing, data aggregation, and communication.  http://savinglivesatbirth.net/summaries/239

· Dimagi, Inc. (CommTrack) – Cambridge, MA, USA: An open-source distribution management system integrating mobile and GPS technology to improve transparency, supply chain functioning, communication, and the timely delivery of medicine to hard to reach, low-income areas in Africa.  http://savinglivesatbirth.net/summaries/243

· Duke University– Durham, NC, USA:  Healthcare system integration of the “Pratt Pouch”-a tiny ketchup-like packet that stores antiretroviral AIDS medication for a year-to enable the pouch to be used in home-birth settings to prevent transmission of HIV from mother to child. Testing taking place in Zambia.  http://savinglivesatbirth.net/summaries/244

· Emory University – Atlanta, GA, USA: A micro-needle patch that co-administers the influenza and tetanus toxoid vaccines to pregnant mothers and children in developing countries.  http://savinglivesatbirth.net/summaries/245

· Nanobiosym, Inc – Cambridge, MA, USA: A nanotech platform which enables rapid, accurate and mobile HIV diagnosis at point-of-care, allowing for timely treatment with antiretroviral therapy to reduce HIV-related mortality in infants in Rwanda.  http://savinglivesatbirth.net/summaries/259

· Oregon Health and Science University – Portland, OR, USA: The Xstat mini-sponge applicator for the treatment of postpartum hemorrhage (PPH).  http://savinglivesatbirth.net/summaries/260

· Population Services International – Washington DC, USA: A new inserter for immediate postpartum intrauterine device (PPIUD) insertions to increase contraceptive uptake in developing countries.  http://savinglivesatbirth.net/summaries/263

· President and Fellows of Harvard College – Boston, MA, USA: A handheld vital sign monitor for the rapid diagnosis of frail and sick newborns.  http://savinglivesatbirth.net/summaries/264

· Program for Appropriate Technology in Health (PATH) – Seattle, WA, USA: A heat-stable oxytocin in a fast-dissolving oral tablet to treat postpartum hemorrhage (PPH).  http://savinglivesatbirth.net/summaries/268

· Program for Appropriate Technology in Health (PATH) – Seattle, WA, USA: A magnesium sulfate (MgSO4) gel that simplifies treatment of pre-eclampsia and eclampsia.  http://savinglivesatbirth.net/summaries/267

· The Board of Regents of the University of Wisconsin System – Madison, WI, USA: A Lactobacillus casei strain that enables the sustainable home production of beta-Carotene enriched dairy products for at-risk mothers and families in Southern Asia.  http://savinglivesatbirth.net/summaries/272

While it’s not stated explicitly, the main focus for Saving Lives at Birth appears to be the continent of Africa as per this video animation which represents the organization’s goals and focus,