Tag Archives: Japan

Quantum teleportation

It’s been two years (my Aug. 16, 2013 posting features a German-Japanese collaboration) since the last quantum teleportation posting here. First, a little visual stimulation,

Captain James T Kirk (credit: http://www.comicvine.com/james-t-kirk/4005-20078/)

Captain James T Kirk (credit: http://www.comicvine.com/james-t-kirk/4005-20078/)

Captain Kirk, also known as William Shatner, is from Montréal, Canada and that’s not the only Canadian connection to this story which is really about some research at York University (UK). From an Oct. 1, 2015 news item on Nanotechnology Now,

Mention the word ‘teleportation’ and for many people it conjures up “Beam me up, Scottie” images of Captain James T Kirk.

But in the last two decades quantum teleportation – transferring the quantum structure of an object from one place to another without physical transmission — has moved from the realms of Star Trek fantasy to tangible reality.

A Sept. 30, 2015 York University (UK) press release, which originated the news item, describes the quantum teleportation research problem and solution,

Quantum teleportation is an important building block for quantum computing, quantum communication and quantum network and, eventually, a quantum Internet. While theoretical proposals for a quantum Internet already exist, the problem for scientists is that there is still debate over which of various technologies provides the most efficient and reliable teleportation system. This is the dilemma which an international team of researchers, led by Dr Stefano Pirandola of the Department of Computer Science at the University of York, set out to resolve.

In a paper published in Nature Photonics, the team, which included scientists from the Freie Universität Berlin and the Universities of Tokyo and Toronto [emphasis mine], reviewed the theoretical ideas around quantum teleportation focusing on the main experimental approaches and their attendant advantages and disadvantages.

None of the technologies alone provide a perfect solution, so the scientists concluded that a hybridisation of the various protocols and underlying structures would offer the most fruitful approach.

For instance, systems using photonic qubits work over distances up to 143 kilometres, but they are probabilistic in that only 50 per cent of the information can be transported. To resolve this, such photon systems may be used in conjunction with continuous variable systems, which are 100 per cent effective but currently limited to short distances.

Most importantly, teleportation-based optical communication needs an interface with suitable matter-based quantum memories where quantum information can be stored and further processed.

Dr Pirandola, who is also a member of the York Centre for Quantum Technologies, said: “We don’t have an ideal or universal technology for quantum teleportation. The field has developed a lot but we seem to need to rely on a hybrid approach to get the best from each available technology.

“The use of quantum teleportation as a building block for a quantum network depends on its integration with quantum memories. The development of good quantum memories would allow us to build quantum repeaters, therefore extending the range of teleportation. They would also give us the ability to store and process the transmitted quantum information at local quantum computers.

“This could ultimately form the backbone of a quantum Internet. The revised hybrid architecture will likely rely on teleportation-based long-distance quantum optical communication, interfaced with solid state devices for quantum information processing.”

Here’s a link to and a citation for the paper,

Advances in quantum teleportation by S. Pirandola, J. Eisert, C. Weedbrook, A. Furusawa, & S. L. Braunstein. Nature Photonics 9, 641–652 (2015) doi:10.1038/nphoton.2015.154 Published online 29 September 2015

This paper is behind a paywall.


Characterizing anatase titanium dixoide at the nanoscale

An international collaboration of researchers combined atomic force microscopy (AFM) and scanning tunneling microscopy (STM) to characterize anatase titanium dixoxide. From a Sept. 14, 2015 news item on Azonano,

A [Japan National Institute for Materials Science] NIMS research team successfully identified the atoms and common defects existing at the most stable surface of the anatase form of titanium dioxide by characterizing this material at the atomic scale with scanning probe microscopy. This work was published under open access policy in the online version of Nature Communications on June 29, 2015.

A June 29, 2015 NIMS press release, which originated the news item, includes the paper’s abstract in numbered point form,

  1. The research team consisting of Oscar Custance and Tomoko Shimizu, group leader and senior scientist, respectively, at the Atomic Force Probe Group, NIMS, Daisuke Fujita and Keisuke Sagisaka, group leader and senior researcher, respectively, at the Surface Characterization Group, NIMS, and scientists at Charles University in the Czech Republic, Autonomous University of Madrid in Spain, and other organizations combined simultaneous atomic force microscopy (AFM) and scanning tunneling microscopy (STM) measurements with first-principles calculations for the unambiguous identification of the atomic species at the most stable surface of the anatase form of titanium dioxide (hereinafter referred to as anatase) and its most common defects.
  2. In recent years, anatase has attracted considerable attention, because it has become a pivotal material in devices for photo-catalysis and for the conversion of solar energy to electricity. It is extremely challenging to grow large single crystals of anatase, and most of the applications of this material are in the form of nano crystals. To enhance the catalytic reactivity of anatase and the efficiency of devices for solar energy conversion based on anatase, it is critical to gain in-depth understanding and control of the reactions taking place at the surface of this material down to the atomic level. Only a few research groups worldwide possess the technology to create proper test samples and to make in-situ atomic-level observations of anatase surfaces.
  3. In this study, the research team used samples obtained from anatase natural single crystals extracted from naturally occurring anatase rocks. The team characterized the (101) surface of anatase at atomic level by means of simultaneous AFM and STM. Using single water molecules as atomic markers, the team successfully identified the atomic species of this surface; result that was additionally confirmed by the comparison of simultaneous AFM and STM measurements with the outcomes of first-principles calculations.
  4. In regular STM, in which an atomically sharp probe is scanned over the surface by keeping constant an electrical current flowing between them, it is difficult to stably image anatase surfaces as this material presents poor electrical conductivity over some of the atomic positions of the surface. However, simultaneous operation of AFM and STM allowed imaging the surface with atomic resolution even within the materials band gap (a region where the flow of current between the probe and the surface is, in principle, prohibited). Here, the detection of inter-atomic forces between the last atom of the atomically sharp probe and the atoms of the surface by AFM was of crucial importance. By regulating the probe-surface distance using AFM, it was possible to image the surface at atomic-scale while collecting STM data over both conductive and not conductive areas of the surface. By comparing simultaneous AFM and STM measurements with theoretical simulations, the team was not only able to discern which atomic species were contributing to the AFM and the STM images but also to identify the most common defects found at the surface.
  5. In the future, based on the information gained from this study, the NIMS research team will conduct research on molecules of technologically relevance that adsorb on anatase and characterize these hybrid systems by using simultaneous AFM and STM. Their ultimate goal is to formulate novel approaches for the development of photo-catalysts and solar cell materials and devices.

Here’s a link to and a citation for the paper,

Atomic species identification at the (101) anatase surface by simultaneous scanning tunnelling and atomic force microscopy by Oleksandr Stetsovych, Milica Todorović, Tomoko K. Shimizu, César Moreno, James William Ryan, Carmen Pérez León, Keisuke Sagisaka, Emilio Palomares, Vladimír Matolín, Daisuke Fujita, Ruben Perez, & Oscar Custance. Nature Communications 6, Article number: 7265 doi:10.1038/ncomms8265 Published 29 June 2015

This is an open access paper.

Watching motor proteins at work

Researchers in the UK and in Japan have described these motor proteins as ‘swinging on monkey bars’,

A Sept. 14, 2015 news item on Nanowerk provides more information about the motor protein observations,

These proteins are vital to complex life, forming the transport infrastructure that allows different parts of cells to specialise in particular functions. Until now, the way they move has never been directly observed.

Researchers at the University of Leeds and in Japan used electron microscopes to capture images of the largest type of motor protein, called dynein, during the act of stepping along its molecular track.

A Sept 14, 2015 Leeds University press release, (also on EurekAlert*) which originated the news item, expands on the theme with what amounts to a transcript of sorts for the video (Note: Links have been removed),

Dr Stan Burgess, at the University of Leeds’ School of Molecular and Cellular Biology, who led the research team, said: “Dynein has two identical motors tied together and it moves along a molecular track called a microtubule. It drives itself along the track by alternately grabbing hold of a binding site, executing a power stroke, then letting go, like a person swinging on monkey bars.

“Previously, dynein movement had only been tracked by attaching fluorescent molecules to the proteins and observing the fluorescence using very powerful light microscopes. It was a bit like tracking vehicles from space with GPS. It told us where they were, their speed and for how long they ran, stopped and so on, but we couldn’t see the molecules in action themselves. These are the first images of these vital processes.”

An understanding of motor proteins is important to medical research because of their fundamental role in complex cellular life. Many viruses hijack motor proteins to hitch a ride to the nucleus for replication. Cell division is driven by motor proteins and so insights into their mechanics could be relevant to cancer research. Some motor neurone diseases are also associated with disruption of motor protein traffic.

The team at Leeds, working within the world-leading Astbury Centre for Structural Molecular Biology, combined purified microtubules with purified dynein motors and added the chemical fuel ATP (adenosine triphosphate) to power the motor.

Dr Hiroshi Imai, now Assistant Professor in the Department of Biological Sciences at Chuo University, Japan, carried out the experiments while working at the University of Leeds.

He explained: “We set the dyneins running along their tracks and then we froze them in ‘mid-stride’ by cooling them at about a million degrees a second, fast enough to prevent the water from forming ice crystals as it solidified. Then using a cryo-electron microscope we took many thousands of images of the motors caught during the act of stepping. By combining many images of individual motors, we were able to sharpen up our picture of the dynein and build up a dynamic idea of how it moved. It is a bit like figuring out how to swing along monkey bars by studying photographs of many people swinging on them.”

Dr Burgess said: “Our most striking discovery was the existence of a hinge between the long, thin stalk and the ‘grappling hook’, like the wrist between a human arm and hand. This allows a lot of variation in the angle of attachment of the motor to its track.

“Each of the two arms of a dynein motor protein is about 25 nanometres (0.000025 millimetre) long, while the binding sites it attaches to are only 8 nanometres apart. That means dynein can reach not only the next rung but the one after that and the one after that and appears to give it flexibility in how it moves along the ‘track’.”

Dynein is not only the biggest but also the most versatile of the motor proteins in living cells and, like all motor proteins, is vital to life. Motor proteins transport cargoes and hold many cellular components in position within the cell. For instance, dynein is responsible for carrying messages from the tips of active nerve cells back to the nucleus and these messages keep the nerve cells alive.

Co-author Peter Knight, Professor of Molecular Contractility in the University of Leeds’ School of Molecular and Cellular Biology, said: “If a cell is like a city, these are like the truckers on its road and rail networks. If you didn’t have a transport system, you couldn’t have specialised regions. Every part of the cell would be doing the same thing and that would mean you could not have complex life.”

“Dynein is the multi-purpose vehicle of cellular transport. Other motor proteins, called kinesins and myosins, are much smaller and have specific functions, but dynein can turn its hand to a lot of different of functions,” Professor Knight said.

For instance, in the motor neurone connecting the central nervous system to the big toe—which is a single cell a metre long— dynein provides the transport from the toe back to the nucleus. Another vital role is in the movement of cells.

Dr Burgess said: “During brain development, neurones must crawl into their correct position and dynein molecules in this instance grab hold of the nucleus and pull it along with the moving mass of the cell. If they didn’t, the nucleus would be left behind and the cytoplasm would crawl away.”

The study involved researchers from the University of Leeds and Japan’s Waseda and Osaka universities, as well as the Quantitative Biology Center at Japan’s Riken research institute and the Japan Science and Technology Agency (JST). The research was funded by the Human Frontiers Science Program and the Biotechnology and Biological Sciences Research Council (BBSRC).

Here’s a link to and a citation for the paper,

Direct observation shows superposition and large scale flexibility within cytoplasmic dynein motors moving along microtubules by Hiroshi Imai, Tomohiro Shima, Kazuo Sutoh, Matthew L. Walker, Peter J. Knight, Takahide Kon, & Stan A. Burgess. Nature Communications 6, Article number: 8179  doi:10.1038/ncomms9179 Published 14 September 2015

This paper is open access.

*The EurekAlert link added Sept. 15, 2015 at 1200 hours PST.

Global overview of nano-enabled food and agriculture regulation

First off, this post features an open access paper summarizing global regulation of nanotechnology in agriculture and food production. From a Sept. 11, 2015 news item on Nanowerk,

An overview of regulatory solutions worldwide on the use of nanotechnology in food and feed production shows a differing approach: only the EU and Switzerland have nano-specific provisions incorporated in existing legislation, whereas other countries count on non-legally binding guidance and standards for industry. Collaboration among countries across the globe is required to share information and ensure protection for people and the environment, according to the paper …

A Sept. 11, 2015 European Commission Joint Research Centre press release (also on EurekAlert*), which originated the news item, summarizes the paper in more detail (Note: Links have been removed),

The paper “Regulatory aspects of nanotechnology in the agri/feed/food sector in EU and non-EU countries” reviews how potential risks or the safety of nanotechnology are managed in different countries around the world and recognises that this may have implication on the international market of nano-enabled agricultural and food products.

Nanotechnology offers substantial prospects for the development of innovative products and applications in many industrial sectors, including agricultural production, animal feed and treatment, food processing and food contact materials. While some applications are already marketed, many other nano-enabled products are currently under research and development, and may enter the market in the near future. Expected benefits of such products include increased efficacy of agrochemicals through nano-encapsulation, enhanced bioavailability of nutrients or more secure packaging material through microbial nanoparticles.

As with any other regulated product, applicants applying for market approval have to demonstrate the safe use of such new products without posing undue safety risks to the consumer and the environment. Some countries have been more active than others in examining the appropriateness of their regulatory frameworks for dealing with the safety of nanotechnologies. As a consequence, different approaches have been adopted in regulating nano-based products in the agri/feed/food sector.

The analysis shows that the EU along with Switzerland are the only ones which have introduced binding nanomaterial definitions and/or specific provisions for some nanotechnology applications. An example would be the EU labelling requirements for food ingredients in the form of ‘engineered nanomaterials’. Other regions in the world regulate nanomaterials more implicitly mainly by building on non-legally binding guidance and standards for industry.

The overview of existing legislation and guidances published as an open access article in the Journal Regulatory Toxicology and Pharmacology is based on information gathered by the JRC, RIKILT-Wageningen and the European Food Safety Agency (EFSA) through literature research and a dedicated survey.

Here’s a link to and a citation for the paper,

Regulatory aspects of nanotechnology in the agri/feed/food sector in EU and non-EU countries by Valeria Amenta, Karin Aschberger, , Maria Arena, Hans Bouwmeester, Filipa Botelho Moniz, Puck Brandhoff, Stefania Gottardo, Hans J.P. Marvin, Agnieszka Mech, Laia Quiros Pesudo, Hubert Rauscher, Reinhilde Schoonjans, Maria Vittoria Vettori, Stefan Weigel, Ruud J. Peters. Regulatory Toxicology and Pharmacology Volume 73, Issue 1, October 2015, Pages 463–476 doi:10.1016/j.yrtph.2015.06.016

This is the most inclusive overview I’ve seen yet. The authors cover Asian countries, South America, Africa, and the MIddle East, as well as, the usual suspects in Europe and North America.

Given I’m a Canadian blogger I feel obliged to include their summary of the Canadian situation (Note: Links have been removed),

4.2. Canada

The Canadian Food Inspection Agency (CFIA) and Public Health Agency of Canada (PHAC), who have recently joined the Health Portfolio of Health Canada, are responsible for food regulation in Canada. No specific regulation for nanotechnology-based food products is available but such products are regulated under the existing legislative and regulatory frameworks.11 In October 2011 Health Canada published a “Policy Statement on Health Canada’s Working Definition for Nanomaterials” (Health Canada, 2011), the document provides a (working) definition of NM which is focused, similarly to the US definition, on the nanoscale dimensions, or on the nanoscale properties/phenomena of the material (see Annex I). For what concerns general chemicals regulation in Canada, the New Substances (NS) program must ensure that new substances, including substances that are at the nano-scale (i.e. NMs), are assessed in order to determine their toxicological profile ( Environment Canada, 2014). The approach applied involves a pre-manufacture and pre-import notification and assessment process. In 2014, the New Substances program published a guidance aimed at increasing clarity on which NMs are subject to assessment in Canada ( Environment Canada, 2014).

Canadian and US regulatory agencies are working towards harmonising the regulatory approaches for NMs under the US-Canada Regulatory Cooperation Council (RCC) Nanotechnology Initiative.12 Canada and the US recently published a Joint Forward Plan where findings and lessons learnt from the RCC Nanotechnology Initiative are discussed (Canada–United States Regulatory Cooperation Council (RCC) 2014).

Based on their summary of the Canadian situation, with which I am familiar, they’ve done a good job of summarizing. Here are a few of the countries whose regulatory instruments have not been mentioned here before (Note: Links have been removed),

In Turkey a national or regional policy for the responsible development of nanotechnology is under development (OECD, 2013b). Nanotechnology is considered as a strategic technological field and at present 32 nanotechnology research centres are working in this field. Turkey participates as an observer in the EFSA Nano Network (Section 3.6) along with other EU candidate countries Former Yugoslav Republic of Macedonia, and Montenegro (EFSA, 2012). The Inventory and Control of Chemicals Regulation entered into force in Turkey in 2008, which represents a scale-down version of the REACH Regulation (Bergeson et al. 2010). Moreover, the Ministry of Environment and Urban Planning published a Turkish version of CLP Regulation (known as SEA in Turkish) to enter into force as of 1st June 2016 (Intertek).

The Russian legislation on food safety is based on regulatory documents such as the Sanitary Rules and Regulations (“SanPiN”), but also on national standards (known as “GOST”) and technical regulations (Office of Agricultural Affairs of the USDA, 2009). The Russian policy on nanotechnology in the industrial sector has been defined in some national programmes (e.g. Nanotechnology Industry Development Program) and a Russian Corporation of Nanotechnologies was established in 2007.15 As reported by FAO/WHO (FAO/WHO, 2013), 17 documents which deal with the risk assessment of NMs in the food sector were released within such federal programs. Safe reference levels on nanoparticles impact on the human body were developed and implemented in the sanitary regulation for the nanoforms of silver and titanium dioxide and, single wall carbon nanotubes (FAO/WHO, 2013).

Other countries included in this overview are Brazil, India, Japan, China, Malaysia, Iran, Thailand, Taiwan, Australia, New Zealand, US, South Africa, South Korea, Switzerland, and the countries of the European Union.

*EurekAlert link added Sept. 14, 2015.

Scaling graphene production up to industrial strength

If graphene is going to be a ubiquitous material in the future, production methods need to change. An Aug. 7, 2015 news item on Nanowerk announces a new technique to achieve that goal,

Producing graphene in bulk is critical when it comes to the industrial exploitation of this exceptional two-dimensional material. To that end, [European Commission] Graphene Flagship researchers have developed a novel variant on the chemical vapour deposition process which yields high quality material in a scalable manner. This advance should significantly narrow the performance gap between synthetic and natural graphene.

An Aug. 7, 2015 European Commission Graphene Flagship press release by Francis Sedgemore, which originated the news item, describes the problem,

Media-friendly Nobel laureates peeling layers of graphene from bulk graphite with sticky tape may capture the public imagination, but as a manufacturing process the technique is somewhat lacking. Mechanical exfoliation may give us pristine graphene, but industry requires scalable and cost-effective production processes with much higher yields.

On to the new method (from the press release),

Flagship-affiliated physicists from RWTH Aachen University and Forschungszentrum Jülich have together with colleagues in Japan devised a method for peeling graphene flakes from a CVD substrate with the help of intermolecular forces. …

Key to the process is the strong van der Waals interaction that exists between graphene and hexagonal boron nitride, another 2d material within which it is encapsulated. The van der Waals force is the attractive sum of short-range electric dipole interactions between uncharged molecules.

Thanks to strong van der Waals interactions between graphene and boron nitride, CVD graphene can be separated from the copper and transferred to an arbitrary substrate. The process allows for re-use of the catalyst copper foil in further growth cycles, and minimises contamination of the graphene due to processing.

Raman spectroscopy and transport measurements on the graphene/boron nitride heterostructures reveals high electron mobilities comparable with those observed in similar assemblies based on exfoliated graphene. Furthermore – and this comes as something of a surprise to the researchers – no noticeable performance changes are detected between devices developed in the first and subsequent growth cycles. This confirms the copper as a recyclable resource in the graphene fabrication process.

“Chemical vapour deposition is a highly scalable and cost-efficient technology,” says Christoph Stampfer, head of the 2nd Institute of Physics A in Aachen, and co-author of the technical article. “Until now, graphene synthesised this way has been significantly lower in quality than that obtained with the scotch-tape method, especially when it comes to the material’s electronic properties. But no longer. We demonstrate a novel fabrication process based on CVD that yields ultra-high quality synthetic graphene samples. The process is in principle suitable for industrial-scale production, and narrows the gap between graphene research and its technological applications.”

With their dry-transfer process, Banszerus and his colleagues have shown that the electronic properties of CVD-grown graphene can in principle match those of ultrahigh-mobility exfoliated graphene. The key is to transfer CVD graphene from its growth substrate in such a way that chemical contamination is avoided. The high mobility of pristine graphene is thus preserved, and the approach allows for the substrate material to be recycled without degradation.

Here’s a link to and citation for the paper,

Ultrahigh-mobility graphene devices from chemical vapor deposition on reusable copper by Luca Banszerus, Michael Schmitz, Stephan Engels, Jan Dauber, Martin Oellers, Federica Haupt, Kenji Watanabe, Takashi Taniguchi, Bernd Beschoten, and Christoph Stampfer. Science Advances  31 Jul 2015: Vol. 1, no. 6, e1500222 DOI: 10.1126/sciadv.1500222

This article appears to be open access.

For those interested in finding out more about chemical vapour deposition (CVD), David Chandler has written a June 19, 2015 article for the Massachusetts Institute of Technology (MIT) titled:  Explained: chemical vapor deposition (Technique enables production of pure, uniform coatings of metals or polymers, even on contoured surfaces.)

Spins in artificial atoms same as spin in natural atoms

I wonder what impact this research on the spin in artificial and natural atoms will have on how we view the word ‘artificial’. (If artificial molecules/atoms are indistinguishable from natural ones, what does it mean to be artificial?)

An Aug. 7, 2015 news item on Nanowerk describes the finding about spin,

By extending the study of coupled quantum dots to five-electron systems, RIKEN [Japan] researchers have confirmed that the spin-based electron-filling rules for natural atoms apply to artificial molecules …

Systems consisting of electrons and semiconductor quantum dots—nanostructures that exhibit quantum properties—are highly intriguing artificial structures that in many ways mimic naturally occurring atoms. For example, electrons occupy the energy levels of quantum dots according to the same rules that determine how electrons fill atomic shells. Such systems are of both fundamental interest, for investigating phenomena related to nuclear spin, and applied interest, for manipulating spin in future quantum computers.

The Pauli exclusion principle, which prohibits any two electrons in an atom from having identical sets of quantum numbers, gives rise to a phenomenon known as the Pauli spin blockade in quantum-dot systems. This effect prevents electrons from following certain energetically favorable paths through a quantum-dot system since two electrons with the same spin cannot occupy the same energy level.
The Pauli spin blockade has been well studied in artificial molecules consisting of two quantum dots and two electrons. Shinichi Amaha and Seigo Tarucha from RIKEN’s Center for Emergent Matter Science, in collaboration with researchers in Japan and Canada, have extended the study of spin blockade to multilevel quantum-dot systems that have more than two electrons. This requires accessing high-spin states, which is difficult to achieve in practice.

TG Techno’s Aug. 7, 2015 posting of the identical news item fills in more details,

Using a two-quantum-dot system with three effective levels, the researchers have achieved spin blockade by exploiting Hund’s first rule, which dictates that electrons in an atom will first fill unoccupied orbitals of a subshell with greater total spin state. They used this principle to prepare the high-spin states needed for spin blockade …

The team discovered that the current of the device varied unexpectedly with the applied magnetic field. In most devices with spin effects, the current lags behind changes to the magnetic field, a phenomenon known as hysteresis. The researchers found that the hysteresis of their system follows the expected spin states based on a consideration of Hund’s rule and that in certain magnetic field regions two hysteresis effects cancelled each other out—clear evidence that competing ‘up’ and ‘down’ nuclear spin pumping processes influence the current.

These findings are expected to open the way to use arrays of such quantum dots as simulators for spin filling in real molecules. “Using an array of quantum dots as artificial atoms could assist investigations of novel spin-related phenomena in real molecules,” says Amaha.

Here’s a link to and a citation for the paper,

Vanishing current hysteresis under competing nuclear spin pumping processes in a quadruplet spin-blockaded double quantum dot by  S. Amaha, T. Hatano, S. Tarucha, J. A. Gupta, and D. G. Austing. Appl. Phys. Lett. 106, 172401 (2015); http://dx.doi.org/10.1063/1.4919101

This paper is behind a paywall.

Canada and some graphene scene tidbits

For a long time It seemed as if every country in the world, except Canada, had some some sort of graphene event. According to a July 16, 2015 news item on Nanotechnology Now, Canada has now stepped up, albeit, in a peculiarly Canadian fashion. First the news,

Mid October [Oct. 14 -16, 2015], the Graphene & 2D Materials Canada 2015 International Conference & Exhibition (www.graphenecanada2015.com) will take place in Montreal (Canada).

I found a July 16, 2015 news release (PDF) announcing the Canadian event on the lead organizer’s (Phantoms Foundation located in Spain) website,

On the second day of the event (15th October, 2015), an Industrial Forum will bring together top industry leaders to discuss recent advances in technology developments and business opportunities in graphene commercialization.
At this stage, the event unveils 38 keynote & invited speakers. On the Industrial Forum 19 of them will present the latest in terms of Energy, Applications, Production and Worldwide Initiatives & Priorities.

Gary Economo (Grafoid Inc., Canada)
Khasha Ghaffarzadeh (IDTechEx, UK)
Shu-Jen Han (IBM T.J. Watson Research Center, USA)
Bor Z. Jang (Angstron Materials, USA)
Seongjun Park (Samsung Advanced Institute of Technology (SAIT), Korea)
Chun-Yun Sung (Lockheed Martin, USA)

Parallel Sessions:
Gordon Chiu (Grafoid Inc., Canada)
Jesus de la Fuente (Graphenea, Spain)
Mark Gallerneault (ALCERECO Inc., Canada)
Ray Gibbs (Haydale Graphene Industries, UK)
Masataka Hasegawa (AIST, Japan)
Byung Hee Hong (SNU & Graphene Square, Korea)
Tony Ling (Jestico + Whiles, UK)
Carla Miner (SDTC, Canada)
Gregory Pognon (THALES Research & Technology, France)
Elena Polyakova (Graphene Laboratories Inc, USA)
Federico Rosei (INRS–EMT, Université du Québec, Canada)
Aiping Yu (University of Waterloo, Canada)
Hua Zhang (MSE-NTU, Singapore)

Apart from the industrial forum, several industry-related activities will be organized:
– Extensive thematic workshops in parallel (Standardization, Materials & Devices Characterization, Bio & Health and Electronic Devices)
– An exhibition carried out with the latest graphene trends (Grafoid, RAYMOR NanoIntegris, Nanomagnetics Instruments, ICEX and Xerox Research Centre of Canada (XRCC) already confirmed)
– B2B meetings to foster technical cooperation in the field of Graphene

It’s still possible to contribute to the event with an oral presentation. The call for abstracts is open until July, 20 [2015]. [emphasis mine]

Graphene Canada 2015 is already supported by Canada’s leading graphene applications developer, Grafoid Inc., Tourisme Montréal and Université de Montréal.

This is what makes the event peculiarly Canadian: multiculturalism, anyone? From the news release,

Organisers: Phantoms Foundation www.phantomsnet.net & Grafoid Foundation (lead organizers)

CEMES/CNRS (France) | Grafoid (Canada) | Catalan Institute of Nanoscience and Nanotechnology – ICN2 (Spain) | IIT (Italy) | McGill University, Canada | Texas Instruments (USA) | Université Catholique de Louvain (Belgium) | Université de Montreal, Canada

It’s billed as a ‘Canada Graphene 2015’ and, as I recall, these types of events don’t usually have so many other countries listed as organizers. For example, UK Graphene 2015 would have mostly or all of its organizers (especially the leads) located in the UK.

Getting to the Canadian content, I wrote about Grafoid at length tracking some of its relationships to companies it owns, a business deal with Hydro Québec, and a partnership with the University of Waterloo, and a nonrepayable grant from the Canadian federal government (Sustainable Development Technology Canada [SDTC]) in a Feb. 23, 2015 posting. Do take a look at the post if you’re curious about the heavily interlinked nature of the Canadian graphene scene and take another look at the list of speakers and their agencies (Mark Gallerneault of ALCERECO [partially owned by Grafoid], Carla Miner of SDTC [Grafoid received monies from the Canadian federal department],  Federico Rosei of INRS–EMT, Université du Québec [another Quebec link], Aiping Yu, University of Waterloo [an academic partner to Grafoid]). The Canadian graphene community is a small one so it’s not surprising there are links between the Canadian speakers but it does seem odd that Lomiko Metals is not represented here. Still, new speakers have been announced since the news release (e.g., Frank Koppens of ICFO, Spain, and Vladimir Falko of Lancaster University, UK) so  time remains.

Meanwhile, Lomiko Metals has announced in a July 17, 2015 news item on Azonano that Graphene 3D labs has changed the percentage of its outstanding shares affecting the percentage that Lomiko owns, amid some production and distribution announcements. The bit about launching commercial sales of its graphene filament seems more interesting to me,

On March 16, 2015 Graphene 3D Lab (TSXV:GGG) (OTCQB:GPHBF) announced that it launched commercial sales of its Conductive Graphene Filament for 3D printing. The filament incorporates highly conductive proprietary nano-carbon materials to enhance the properties of PLA, a widely used thermoplastic material for 3D printing; therefore, the filament is compatible with most commercially available 3D printers. The conductive filament can be used to print conductive traces (similar to as used in circuit boards) within 3D printed parts for electronics.

So, that’s all I’ve got for Canada’s graphene scene.

Do artists see colour at the nanoscale? It would seem so

I’ve wondered how Japanese artists of the 16th to 18th centuries were able to beat gold down to the nanoscale for application to screens. How could they see what they were doing? I may have an answer at last. According to some new research, it seems that the human eye can detect colour at the nanoscale.

Before getting to the research, here’s the Namban screen story.

Japanese Namban Screen. ca. 1550. In Portugal-Japão: 450 anos de memórias. Embaixada de Portugal no Japão, 1993. [downloaded from http://www.indiana.edu/~liblilly/digital/exhibitions/exhibits/show/portuguese-speaking-diaspora/china-and-japan]

Japanese Namban Screen. ca. 1550. In Portugal-Japão: 450 anos de memórias. Embaixada de Portugal no Japão, 1993. [downloaded from http://www.indiana.edu/~liblilly/digital/exhibitions/exhibits/show/portuguese-speaking-diaspora/china-and-japan]

This image is from an Indiana University at Bloomington website featuring a page titled, Portuguese-Speaking Diaspora,

A detail from one of four large folding screens on display in the Museu de Arte Antiga in Lisbon. Namban was the word used to refer to Portuguese traders who, in this scene, are dressed in colorful pantaloons and accompanied by African slaves. Jesuits appear in black robes, while the Japanese observe the newcomers from inside their home. The screen materials included gold-covered copper and paper, tempera paint, silk, and lacquer.

Copyright © 2015 The Trustees of Indiana University

Getting back to the Japanese artists, here’s how their work was described in a July 2, 2014 Springer press release on EurekAlert,

Ancient Japanese gold leaf artists were truly masters of their craft. An analysis of six ancient Namban paper screens show that these artifacts are gilded with gold leaf that was hand-beaten to the nanometer scale. [emphasis mine] Study leader Sofia Pessanha of the Atomic Physics Center of the University of Lisbon in Portugal believes that the X-ray fluorescence technique her team used in the analysis could also be used to date other artworks without causing any damage to them. The results are published in Springer’s journal Applied Physics A: Materials Science & Processing.

Gold leaf refers to a very thin sheet made from a combination of gold and other metals. It has almost no weight and can only be handled by specially designed tools. Even though the ancient Egyptians were probably the first to gild artwork with it, the Japanese have long been credited as being able to produce the thinnest gold leaf in the world. In Japanese traditional painting, decorating with gold leaf is named Kin-haku, and the finest examples of this craft are the Namban folding screens, or byobu. These were made during the late Momoyama (around 1573 to 1603) and early Edo (around 1603 to 1868) periods.

Pessanha’s team examined six screens that are currently either part of a museum collection or in a private collection in Portugal. Four screens belong to the Momoyama period, and two others were decorated during the early Edo period. The researchers used various X-ray fluorescence spectroscopy techniques to test the thickness and characteristics of the gold layers. The method is completely non-invasive, no samples needed to be taken, and therefore the artwork was not damaged in any way. Also, the apparatus needed to perform these tests is portable and can be done outside of a laboratory.

The gilding was evaluated by taking the attenuation or weakening of the different characteristic lines of gold leaf layers into account. The methodology was tested to be suitable for high grade gold alloys with a maximum of 5 percent influence of silver, which is considered negligible.

The two screens from the early Edo period were initially thought to be of the same age. However, Pessanha’s team found that gold leaf on a screen kept at Museu Oriente in Lisbon was thinner, hence was made more recently. This is in line with the continued development of the gold beating techniques carried out in an effort to obtain ever thinner gold leaf.

So, how did these artists beat gold leaf down to the nanoscale and then use the sheets in their art work? This July 10, 2015 news item on Azonano may help to answer that question,

The human eye is an amazing instrument and can accurately distinguish between the tiniest, most subtle differences in color. Where human vision excels in one area, it seems to fall short in others, such as perceiving minuscule details because of the natural limitations of human optics.

In a paper published today in The Optical Society’s new, high-impact journal Optica, a research team from the University of Stuttgart, Germany and the University of Eastern Finland, Joensuu, Finland, has harnessed the human eye’s color-sensing strengths to give the eye the ability to distinguish between objects that differ in thickness by no more than a few nanometers — about the thickness of a cell membrane or an individual virus.

A July 9, 2015 Optical Society news release (also on EurkeAlert), which originated the news item, provides more details,

This ability to go beyond the diffraction limit of the human eye was demonstrated by teaching a small group of volunteers to identify the remarkably subtle color differences in light that has passed through thin films of titanium dioxide under highly controlled and precise lighting conditions. The result was a remarkably consistent series of tests that revealed a hitherto untapped potential, one that rivals sophisticated optics tools that can measure such minute thicknesses, such as ellipsometry.

“We were able to demonstrate that the unaided human eye is able to determine the thickness of a thin film — materials only a few nanometers thick — by simply observing the color it presents under specific lighting conditions,” said Sandy Peterhänsel, University of Stuttgart, Germany and principal author on the paper. The actual testing was conducted at the University of Eastern Finland.

The Color and Thickness of Thin Films

Thin films are essential for a variety of commercial and manufacturing applications, including anti-reflective coatings on solar panels. These films can be as small as a few to tens of nanometers thick. The thin films used in this experiment were created by applying layer after layer of single atoms on a surface. Though highly accurate, this is a time-consuming procedure and other techniques like vapor deposition are used in industry.

The optical properties of thin films mean that when light interacts with their surfaces it produces a wide range of colors. This is the same phenomenon that produces scintillating colors in soap bubble and oil films on water.

The specific colors produced by this process depend strongly on the composition of the material, its thickness, and the properties of the incoming light. This high sensitivity to both the material and thickness has sometimes been used by skilled engineers to quickly estimate the thickness of films down to a level of approximately 10-20 nanometers.

This observation inspired the research team to test the limits of human vision to see how small of a variation could be detected under ideal conditions.

“Although the spatial resolving power of the human eye is orders of magnitude too weak to directly characterize film thicknesses, the interference colors are well known to be very sensitive to variations in the film,” said Peterhänsel.

Experimental Setup

The setup for this experiment was remarkably simple. A series of thin films of titanium dioxide were manufactured one layer at a time by atomic deposition. While time consuming, this method enabled the researchers to carefully control the thickness of the samples to test the limitations of how small a variation the research subjects could identify.

The samples were then placed on a LCD monitor that was set to display a pure white color, with the exception of a colored reference area that could be calibrated to match the apparent surface colors of the thin films with various thicknesses.

The color of the reference field was then changed by the test subject until it perfectly matched the reference sample: correctly identifying the color meant they also correctly determined its thickness. This could be done in as little as two minutes, and for some samples and test subjects their estimated thickness differed only by one-to-three nanometers from the actual value measured by conventional means. This level of precision is far beyond normal human vision.

Compared to traditional automated methods of determining the thickness of a thin film, which can take five to ten minutes per sample using some techniques, the human eye performance compared very favorably.

Since human eyes tire very easily, this process is unlikely to replace automated methods. It can, however, serve as a quick check by an experienced technician. “The intention of our study never was solely to compare the human color vision to much more sophisticated methods,” noted Peterhänsel. “Finding out how precise this approach can be was the main motivation for our work.”

The researchers speculate that it may be possible to detect even finer variations if other control factors are put in place. “People often underestimate human senses and their value in engineering and science. This experiment demonstrates that our natural born vision can achieve exceptional tasks that we normally would only assign to expensive and sophisticated machinery,” concludes Peterhänsel.

Here’s a link to and a citation for the paper,

Human color vision provides nanoscale accuracy in thin-film thickness characterization by Sandy Peterhänsel, Hannu Laamanen, Joonas Lehtolahti, Markku Kuittinen, Wolfgang Osten, and Jani Tervo. Optica Vol. 2, Issue 7, pp. 627-630 (2015) •doi: 10.1364/OPTICA.2.000627

This article appears to be open access.

It would seem that the artists creating the Namban screens exploited the ability to see at the nanoscale, which leads me to  wonder how many people who work with color/colour all the time such as visual artists, interior designers, graphic designers, printers, and more can perceive at the nanoscale. These German and Finnish researchers may want to work with some of these professionals in their next study.

Repeating patterns: earth’s daily rotation cycle seen in protein

This story made me think of fractals where a pattern at one scale is repeated at a smaller scale. Here’s more about the earth’s rotation and the protein from a June 25, 2015 news item on ScienceDaily,

A collaborative group of Japanese researchers has demonstrated that the Earth’s daily rotation period (24 hours) is encoded in the KaiC protein at the atomic level, a small, 10 nm-diameter biomolecule expressed in cyanobacterial cells.

For anyone who’s unfamiliar (me) with cyanobacteria, here’s a definition from its Wikipedia entry (Note: Links have been removed),

Cyanobacteria /saɪˌænoʊbækˈtɪəriə/, also known as Cyanophyta, is a phylum of bacteria that obtain their energy through photosynthesis.[3] The name “cyanobacteria” comes from the color of the bacteria (Greek: κυανός (kyanós) = blue). They are often called blue-green algae (but some consider that name a misnomer, as cyanobacteria are prokaryotic and algae should be eukaryotic,[4] although other definitions of algae encompass prokaryotic organisms).[5]

By producing gaseous oxygen as a byproduct of photosynthesis, cyanobacteria are thought to have converted the early reducing atmosphere into an oxidizing one, causing the “rusting of the Earth”[6] and dramatically changing the composition of life forms on Earth by stimulating biodiversity and leading to the near-extinction of oxygen-intolerant organisms. According to endosymbiotic theory, the chloroplasts found in plants and eukaryotic algae evolved from cyanobacterial ancestors via endosymbiosis.

The idea that cyanobacteria may have changed the earth’s atmosphere into an oxidizing one and stimulating biodiversity is fascinating to me. Plus, cyanobacteria are pretty,

    CC BY-SA 3.0     File:Tolypothrix (Cyanobacteria).JPG     Uploaded by Matthewjparker     Created: January 22, 2013     Location: 29° 38′ 58.2″ N, 82° 20′ 40.8″ W [downloaded from https://en.wikipedia.org/wiki/Cyanobacteria]

CC BY-SA 3.0
File:Tolypothrix (Cyanobacteria).JPG
Uploaded by Matthewjparker
Created: January 22, 2013
Location: 29° 38′ 58.2″ N, 82° 20′ 40.8″ W [downloaded from https://en.wikipedia.org/wiki/Cyanobacteria]

A June 26, 2015 Japan National Institute of Natural Sciences, which originated the news item, provides more information,

The results of this joint research will help elucidate a longstanding question in chronobiology: How is the circadian period of biological clocks determined? The results will also help understand the basic molecular mechanism of the biological clock. This knowledge might contribute to the development of therapies for disorders associated with abnormal circadian rhythms.

The results will be disclosed online on June 25, 2015 (North American Eastern Standard Time) in ScienceExpress, the electronic version of Science, published by the American Association for the Advancement of Science (AAAS).
1. Research Background

In accordance with diurnal changes in the environment (notably light intensity and temperature) resulting from the Earth’s daily rotation around its axis, many organisms regulate their biological activities to ensure optimal fitness and efficiency. The biological clock refers to the mechanism whereby organisms adjust the timing of their biological activities. The period of this clock is set to approximately 24 hours. A wide range of studies have investigated the biological clock in organisms ranging from bacteria to mammals. Consequently, the relationship between the biological clock and multiple diseases has been clarified. However, it remains unclear how 24-hour circadian rhythms are implemented.

The research group mentioned above addressed this question using cyanobacteria. The cyanobacterial circadian clock can be reconstructed by mixing three clock proteins (KaiA, KaiB, and KaiC) and ATP. A study published in 2007 showed that KaiC ATPase activity, which mediates the ATP hydrolysis reaction, is strongly associated with circadian periodicity. The results of that study indicated that the functional structure of KaiC could be responsible for determining the circadian rhythm.


Figure 1  Earth and the circadian clock protein KaiC
2. Research Results

KaiC ATPase activity exhibits a robust circadian oscillation in the presence of KaiA and KaiB proteins (Figure 2). In the study reported here, the temporal profile of KaiC ATPase activity exhibited an attenuating and oscillating component even in the absence of KaiA and KaiB. A close analysis revealed that this signal had a frequency of 0.91 day-1, which approximately coincided with the 24-hour period. Thus, KaiC is the source of a steady cycle that is in tune with the Earth’s daily rotation.

Figure 2  KaiC ATPase activity-time profile
To identify causal structural factors, the N-terminal domain of KaiC was analyzed using high-resolution crystallography. The resultant atomic structures revealed the underlying cause of KaiC’s slowness relative to other ATPases (Figure 3). “A water molecule is prevented from attacking into the ideal position (a black dot in Figure 3) for the ATP hydrolysis by a steric hindrance near ATP phosphoryl groups. In addition, this hindrance is surely anchored to a spring-like structure derived from polypeptide isomerization,” elaborates Dr. Jun Abe. “The ATP hydrolysis, which involves access of a water molecule to the bound ATP and reverse isomerization of the polypeptide, is expected to require a significantly larger amount of free energy than for typical ATP hydrolysis. Thus, the three-dimensional atomic structure discovered in this study explains why the ATPase activity of KaiC is so much lower (by 100- to 1,000,000-fold) than that of typical ATPase molecules.”

150626_en3.jpgFigure 3  Structural basis for steady slowness. The steric barrier prevents access of a water molecule to the catalytic site (indicated by a black dot).

The circadian clock’s period is independent of ambient temperature, a phenomenon known as temperature compensation. One KaiC molecule is composed of six identical subunits, each containing duplicated domains with a series of ATPase motifs. The asymmetric atomic-scale regulation by the aforementioned mechanism dictates a feedback mechanism that maintains the ATPase activity at a constant low level. The authors of this study discovered that the Earth’s daily rotation period (24 hours) is implemented as the time constant of the feedback mechanism mediated in this protein structure.

3. Technological Implications

KaiC and other protein molecules are capable of moving on short time scales, on the order of 10-12 to 10-1 seconds. This study provides the first atomic-level demonstration that small protein molecules can generate 24-hour rhythms by regulating molecular structure and reactivity. Lab head and CIMoS Director Prof. Shuji Akiyama sees, “The fact that a water molecule, ATP, the polypeptide chain, and other universal biological components are involved in this regulation suggests that humans and other complex organisms may also share a similar molecular machinery. In the crowded intracellular environment that contains a myriad of molecular signals, KaiC demonstrates long-paced oscillations using a small amount of energy generated through ATP consumption. This clever mechanism for timekeeping in a noisy environment may inspire development of highly efficient and sustainable chemical reaction processes and molecular-system-based information processing.”
4. Glossary

1) Clock protein
A clock protein plays an essential role in the circadian pacemaker. Mutations and deficiencies in clock proteins can alter the intrinsic characteristics of circadian rhythm.

2) ATP
Adenosine triphosphate is a source of energy required for muscle contraction and many other biological activities. ATP, a nucleotide that mediates the storage and consumption of energy, is sometimes referred to as the “currency of biological energy” due to its universality and importance in metabolism. ATP consists of an adenosine molecule bound to three phosphate groups. Upon hydrolysis, the ATPase releases one phosphate molecule plus approximately 8 kcal/mol of energy.

3) Polypeptide isomerization
Protein polypeptide main chains undergo isomerization on a time scale of seconds or longer; therefore, protein isomerization is one of the slowest biological reactions. Most functional protein main chains have a trans conformation, and a few proteins have a functional cis conformation.

Here’s a link to and a citation for the paper,

Atomic-scale origins of slowness in the cyanobacterial circadian clock by Jun Abe, Takuya B. Hiyama, Atsushi Mukaiyama, Seyoung Son, Toshifumi Mori, Shinji Saito, Masato Osako, Julie Wolanin, Eiki Yamashita, Takao Kondo, & Shuji Akiyama. Science DOI: 10.1126/science.1261040 Published Online June 25 2015 (on Science Express)

This paper is behind a paywall.

Kudos to the person(s) who wrote the news release.

Japanese researchers note the emergence of the ‘Devil’s staircase’

I wanted to know why it’s called the ‘Devil’s staircase’ and this is what I found. According to Wikipedia there are several of them,

I gather the scientists are referring to the Cantor function (mathematics), Note: Links have been removed,

In mathematics, the Cantor function is an example of a function that is continuous, but not absolutely continuous. It is also referred to as the Cantor ternary function, the Lebesgue function, Lebesgue’s singular function, the Cantor-Vitali function, the Devil’s staircase,[1] the Cantor staircase function,[2] and the Cantor-Lebesgue function.[3]

Here’s a diagram illustrating the Cantor function (from the Wikipedia entry),

CC BY-SA 3.0 File:CantorEscalier.svg Uploaded by Theon Created: January 24, 2009

CC BY-SA 3.0
Uploaded by Theon
Created: January 24, 2009

As for this latest ‘Devil’s staircase’, a June 17, 2015 news item on Nanowerk announces the research (Note: A link has been removed),

Researchers at the University of Tokyo have revealed a novel magnetic structure named the “Devil’s staircase” in cobalt oxides using soft X-rays (“Observation of a Devil’s Staircase in the Novel Spin-Valve System SrCo6O11“). This is an important result since the researchers succeeded in determining the detailed magnetic structure of a very small single crystal invisible to the human eye.

A June 17, 2015 University of Tokyo press release, which originated the news item on Nanowerk, describes why this research is now possible and the impact it could have,

Recent remarkable progress in resonant soft x-ray diffraction performed in synchrotron facilities has made it possible to determine spin ordering (magnetic structure) in small-volume samples including thin films and nanostructures, and thus is expected to lead not only to advances in materials science but also application to spintronics, a technology which is expected to form the basis of future electronic devices. Cobalt oxide is known as one material that is suitable for spintronics applications, but its magnetic structure was not fully understood.

The research group of Associate Professor Hiroki Wada at the University of Tokyo Institute for Solid State Physics, together with the researchers at Kyoto University and in Germany, performed a resonant soft X-ray diffraction study of cobalt (Co) oxides in the synchrotron facility BESSY II in Germany. They observed all the spin orderings which are theoretically possible and determined how these orderings change with the application of magnetic fields. The plateau-like behavior of magnetic structure as a function of magnetic field is called the “Devil’s staircase,” and is the first such discovery in spin systems in 3D transition metal oxides including cobalt, iron, manganese.

By further resonant soft X-ray diffraction studies, one can expect to find similar “Devil’s staircase” behavior in other materials. By increasing the spatial resolution of microscopic observation of the “Devil’s staircase” may lead to the development of novel types of spintronics materials.

Here’s an example of the ‘cobalt’ Devil’s staircase,

The magnetic structure that gives rise to the Devil's Staircase Magnetization (vertical axis) of cobalt oxide shows plateau like behaviors as a function of the externally-applied magnetic field (horizontal axis). The researchers succeeded in determining the magnetic structures which create such plateaus. Red and blue arrows indicate spin direction. © 2015 Hiroki Wadati.

The magnetic structure that gives rise to the Devil’s Staircase
Magnetization (vertical axis) of cobalt oxide shows plateau like behaviors as a function of the externally-applied magnetic field (horizontal axis). The researchers succeeded in determining the magnetic structures which create such plateaus. Red and blue arrows indicate spin direction.
© 2015 Hiroki Wadati.

Here’s a link to and a citation for the paper,

Observation of a Devil’s Staircase in the Novel Spin-Valve System SrCo6O11 by T. Matsuda, S. Partzsch, T. Tsuyama, E. Schierle, E. Weschke, J. Geck, T. Saito, S. Ishiwata, Y. Tokura, and H. Wadati. Phys. Rev. Lett. 114, 236403 – Published 11 June 2015 (paper: Vol. 114, Iss. 23 — 12 June 2015)  DOI: 10.1103/PhysRevLett.114.236403

This paper is behind a paywall.