Tag Archives: Advanced Light Source (ALS)

Key to developing stronger, ‘greener’ adhesives: fresh water oysters

A September 17, 2024 news item on phys.org highlights some research on creating ‘green’, i.e., environmentally friendly, glue,

Freshwater oysters produce an adhesive that may hold the secret to developing more environmentally friendly glues with applications from dental care to construction and shipping. An international research team recently used the Canadian Light Source (CLS) at the University of Saskatchewan (USask [Canada]) to determine what the unique adhesive is made of.

Thriving in African rivers and lakes, Etheria elliptica oysters produce a special material that helps them stick to wood or other oysters, creating complex underwater reefs. Never studied before, this oyster glue has characteristics rarely found in similar organisms: it’s made of a mineral called aragonite that the oyster arranges so that it is soft on the outside and progressively harder on the inside.

A September 17, 2024 Canadian Light Source (CLS) news release (also received via email) by Federica Gianelli provides more detail about the research,

“These oyster shells aren’t exactly like our teeth and our bones, but there are a lot of similarities,” says Rebecca Metzler, professor of physics at Colgate University in New York State. “And so, if the adhesive can work for the oyster shell, maybe it could work pretty well for what’s happening inside of us.”

Metzler and her team found that the oyster glue is so sticky because it combines the aragonite with special proteins that the oyster produces. This information could pave the way for the development of better synthetic, “green” glues that mimic the properties of the oyster’s adhesive.

“Because I’m looking at this biological tissue, I need a certain energy range, and the Canadian Light Source has that sweet spot of having both the microscope and the energy range,” says Metzler. “You can look at your sample, get the spectral data that you need to be able to answer questions about what is this made up of, and how these things are structured.”

Her team discovered that the oyster glue is made up of tiny particles of aragonite that clump together into crystals of random shapes, sizes and orientation, information, says Metzler, that can be used to create synthetic versions in a lab. This research, which also relied on data gathered at the Advanced Light Source (ALS) synchrotron [located at the Lawrence Berkeley National Laboratory in California, US] , is published in the journal Advanced Materials Interfaces.

What they’ve learned could have multiple applications, Metzler says. Glues synthesized from the oyster’s adhesive could be used to bind dental implants, replace glues currently used in the packaging industry with bio-degradable alternatives, or even build structures underwater.

Metzler’s research may also prove critical for the ecological conservation of Etheria elliptica oysters. With freshwater mussel populations declining globally, understanding how these organisms create underwater reefs is key to preserving habitats that ensure the oysters’ survival in a warming climate, as well as informing local populations about sustainable oyster harvesting.

Because the oysters used in Metzler’s study were collected years ago, a next step will be investigating the impact of climate change on more recent samples.

“Whether there’s been a change similar to what we’re seeing in other organisms, that would be another thing we’d be interested in trying to figure out.”

Here’s a link to and a citation for the paper,

Exploring the Mineral Composition, Structure, and Function of a Freshwater Bivalve Adhesive by Rebecca A. Metzler, Julia Zaborowsky, Leon Nichols, Jack Underhill, Jack Tregidga, Chelsea Rogers, Deniz Rende, Steven Bouillon, David P. Gillikin. Advanced Materials Interfaces Volume 11, Issue 17 June 17, 2024 2300954 DOI: https://doi.org/10.1002/admi.202300954 First published online: 03 May 2024

This paper is open access.

More dirt from Saskatoon’s synchrotron (Canadian Light Source)

Apparently, dirt is not welcome at most synchrotrons (also known as light sources) as was noted in my November 13, 2022 posting about Saskatoon’s synchrotron being used to analyze some soil from Hawaii. This time, according to a September 4, 2024 Canadian Light Source (CLS) news release by Rowan Hollinger (also received via email), the soil is from Kansas and there appears to be a second synchroton involved in this research,

With carbon dioxide levels in the atmosphere increasing in recent decades, there is a growing urgency to find strategies for capturing and holding carbon.

Researchers from Kansas State University (K-State) are exploring how different farming practices can affect the amount of carbon that gets stored in soil. Using the Canadian Light Source (CLS) at the University of Saskatchewan (USask) and the Advanced Light Source in Berkeley, California, they analyzed soil from a cornfield in Kansas that had been farmed with no tilling for the past 22 years. During that time, the farm used a variety of different soil nitrogen management practices, including no fertilizer, chemical fertilizer, and manure/compost fertilizer.

“We were trying to understand what the mechanisms are behind increasing soil carbon storage using certain management practices,” says Dr. Ganga Hettiarachchi, professor of soil and environmental chemistry at Kansas State University. “We were looking at not just soil carbon, but other soil minerals that are going to help store carbon.”

As has been shown in other studies, the K-state researchers found that the soil enhanced (treated) with manure or compost fertilizer stores more carbon than soil that received either chemical fertilizer or no fertilizer. More exciting though, says Hettiarachchi, the ultrabright synchrotron light enabled them to see how the carbon gets stored: they found that it was preserved in pores and some carbon had attached itself to minerals in the soil.

The team also found that the soil treated with manure or compost contained more microbial carbon, an indication that these enhancements support more microorganisms and their activities in the soil. In addition, they identified special minerals in the soil, evidence Hettiarachchi says, that the treatments contribute to active chemical and biological processes.

“To my knowledge, this is the first direct evidence of mechanisms through which organic enhancements improve soil health, microbial diversity, and carbon sequestration.”

Because synchrotron imaging is non-destructive, the K-state researchers were able to observe what was going on in soil aggregate (clumps) without having to break up the soil; essentially, they were looking at the carbon chemistry in its natural state.

“Collectively, studies like this are going to help us to move forward to more sustainable, more regenerative agriculture practices that will protect our soils and environment as well as help feed growing populations, says Hettiarachchi. “As well, understanding the role of the different minerals, chemicals, and microbes involved will help improve models for predicting how different farming practices affect soil carbon storage.”

Here’s a link to and a citation for the paper,

Direct evidence on the impact of organic amendments on carbon stabilization in soil microaggregates by Pavithra S. Pitumpe Arachchige, Ganga M. Hettiarachchi, Charles W. Rice, James J. Dynes, Leila Maurmann, A. L. David Kilcoyne, Chammi P. Attanayake. Soil Science Society of America Journal (2024) DOI: https://doi.org/10.1002/saj2.20701 First published: 21 June 2024

This paper is behind a paywall.

X-rays reveal memristor workings

A June 14, 2016 news item on ScienceDaily focuses on memristors. (It’s been about two months since my last memristor posting on April 22, 2016 regarding electronic synapses and neural networks). This piece announces new insight into how memristors function at the atomic scale,

In experiments at two Department of Energy national labs — SLAC National Accelerator Laboratory and Lawrence Berkeley National Laboratory — scientists at Hewlett Packard Enterprise (HPE) [also referred to as HP Labs or Hewlett Packard Laboratories] have experimentally confirmed critical aspects of how a new type of microelectronic device, the memristor, works at an atomic scale.

This result is an important step in designing these solid-state devices for use in future computer memories that operate much faster, last longer and use less energy than today’s flash memory. …

“We need information like this to be able to design memristors that will succeed commercially,” said Suhas Kumar, an HPE scientist and first author on the group’s technical paper.

A June 13, 2016 SLAC news release, which originated the news item, offers a brief history according to HPE and provides details about the latest work,

The memristor was proposed theoretically [by Dr. Leon Chua] in 1971 as the fourth basic electrical device element alongside the resistor, capacitor and inductor. At its heart is a tiny piece of a transition metal oxide sandwiched between two electrodes. Applying a positive or negative voltage pulse dramatically increases or decreases the memristor’s electrical resistance. This behavior makes it suitable for use as a “non-volatile” computer memory that, like flash memory, can retain its state without being refreshed with additional power.

Over the past decade, an HPE group led by senior fellow R. Stanley Williams has explored memristor designs, materials and behavior in detail. Since 2009 they have used intense synchrotron X-rays to reveal the movements of atoms in memristors during switching. Despite advances in understanding the nature of this switching, critical details that would be important in designing commercially successful circuits  remained controversial. For example, the forces that move the atoms, resulting in dramatic resistance changes during switching, remain under debate.

In recent years, the group examined memristors made with oxides of titanium, tantalum and vanadium. Initial experiments revealed that switching in the tantalum oxide devices could be controlled most easily, so it was chosen for further exploration at two DOE Office of Science User Facilities – SLAC’s Stanford Synchrotron Radiation Lightsource (SSRL) and Berkeley Lab’s Advanced Light Source (ALS).

At ALS, the HPE researchers mapped the positions of oxygen atoms before and after switching. For this, they used a scanning transmission X-ray microscope and an apparatus they built to precisely control the position of their sample and the timing and intensity of the 500-electronvolt ALS X-rays, which were tuned to see oxygen.

The experiments revealed that even weak voltage pulses create a thin conductive path through the memristor. During the pulse the path heats up, which creates a force that pushes oxygen atoms away from the path, making it even more conductive. Reversing the voltage pulse resets the memristor by sucking some of oxygen atoms back into the conducting path, thereby increasing the device’s resistance. The memristor’s resistance changes between 10-fold and 1 million-fold, depending on operating parameters like the voltage-pulse amplitude. This resistance change is dramatic enough to exploit commercially.

To be sure of their conclusion, the researchers also needed to understand if the tantalum atoms were moving along with the oxygen during switching. Imaging tantalum required higher-energy, 10,000-electronvolt X-rays, which they obtained at SSRL’s Beam Line 6-2. In a single session there, they determined that the tantalum remained stationary.

“That sealed the deal, convincing us that our hypothesis was correct,” said HPE scientist Catherine Graves, who had worked at SSRL as a Stanford graduate student. She added that discussions with SLAC experts were critical in guiding the HPE team toward the X-ray techniques that would allow them to see the tantalum accurately.

Kumar said the most promising aspect of the tantalum oxide results was that the scientists saw no degradation in switching over more than a billion voltage pulses of a magnitude suitable for commercial use. He added that this knowledge helped his group build memristors that lasted nearly a billion switching cycles, about a thousand-fold improvement.

“This is much longer endurance than is possible with today’s flash memory devices,” Kumar said. “In addition, we also used much higher voltage pulses to accelerate and observe memristor failures, which is also important in understanding how these devices work. Failures occurred when oxygen atoms were forced so far away that they did not return to their initial positions.”

Beyond memory chips, Kumar says memristors’ rapid switching speed and small size could make them suitable for use in logic circuits. Additional memristor characteristics may also be beneficial in the emerging class of brain-inspired neuromorphic computing circuits.

“Transistors are big and bulky compared to memristors,” he said. “Memristors are also much better suited for creating the neuron-like voltage spikes that characterize neuromorphic circuits.”

The researchers have provided an animation illustrating how memristors can fail,

This animation shows how millions of high-voltage switching cycles can cause memristors to fail. The high-voltage switching eventually creates regions that are permanently rich (blue pits) or deficient (red peaks) in oxygen and cannot be switched back. Switching at lower voltages that would be suitable for commercial devices did not show this performance degradation. These observations allowed the researchers to develop materials processing and operating conditions that improved the memristors’ endurance by nearly a thousand times. (Suhas Kumar) Courtesy: SLAC

This animation shows how millions of high-voltage switching cycles can cause memristors to fail. The high-voltage switching eventually creates regions that are permanently rich (blue pits) or deficient (red peaks) in oxygen and cannot be switched back. Switching at lower voltages that would be suitable for commercial devices did not show this performance degradation. These observations allowed the researchers to develop materials processing and operating conditions that improved the memristors’ endurance by nearly a thousand times. (Suhas Kumar) Courtesy: SLAC

Here’s a link to and a citation for the paper,

Direct Observation of Localized Radial Oxygen Migration in Functioning Tantalum Oxide Memristors by Suhas Kumar, Catherine E. Graves, John Paul Strachan, Emmanuelle Merced Grafals, Arthur L. David Kilcoyne3, Tolek Tyliszczak, Johanna Nelson Weker, Yoshio Nishi, and R. Stanley Williams. Advanced Materials, First published: 2 February 2016; Print: Volume 28, Issue 14 April 13, 2016 Pages 2772–2776 DOI: 10.1002/adma.201505435

This paper is behind a paywall.

Some of the ‘memristor story’ is contested and you can find a brief overview of the discussion in this Wikipedia memristor entry in the section on ‘definition and criticism’. There is also a history of the memristor which dates back to the 19th century featured in my May 22, 2012 posting.