Tag Archives: Takashi Yamamoto

Gene-edited food: better tasting and/or allergen-free?

I have two items about gene-edited food. One is from the Canadian Broadcasting Corporation (CBC) and the other is from Hiroshima University (Japan).

Better tasting food?

Cherries without pits do not fit my definition of better tasting food but it’s just one of the touted ‘improvements’.

https://i.cbc.ca/1.6513602.1684353993!/fileImage/httpImage/image.jpg_gen/derivatives/16x9_780/a-little-dirt-never-hurt-01.jpg
Can you imagine eating cherries without having to deal with its pits? That could be a reality thanks to gene-editing tools like CRISPR. (Ben Nelms/CBC)

A May 18, 2023 article by Mouhamad Rachini for CBC’s radio programme, The Current, features information from a radio segment on gene-edited food,

When Michael Wolf tried a new type of mustard green that had been gene-edited to taste less bitter, he came away impressed.

“I don’t necessarily like my food very bitter, so I appreciated it,” Wolf, founder of the food tech publication The Spoon, told The Current’s Matt Galloway.

Food scientists are starting to use gene-editing technology, called CRISPR [clustered regularly interspaced short palindromic repeats], to change certain features of some Canadians’ favourite fruits and vegetables. For example, scientists told Wolf that the technology could be used to create cherries without a pit.

Pairwise, a North Carolina-based gene-editing startup, recently rolled out a mustard green engineered to be less bitter than the original plant. It’s the first CRISPR-edited food to hit the U.S. market. 

Although the gene-edited mustard greens haven’t appeared in Canada yet, the process could find a home here very soon.

Earlier this month, Minister of Agriculture and Agri-Food Marie-Claude Bibeau announced that the Canadian Food Inspection Agency (CFIA) seed guidelines now allow for some modified plants.

The updated rules now allow seeds created through gene-editing without an independent safety assessment by the government, as long as they aren’t spliced with DNA from other types of fruits or vegetables, or altered to make them pesticide-resistant. [emphasis mine]

Wolf explained further that gene-editing with CRISPR has some key differences from other types of genetic modification for food, which has been around for some time.

“[With genetic modification], you’re maybe inserting a foreign DNA into a molecule. But with CRISPR, what it’s essentially doing is just cutting out undesirable traits,” he said. [emphasis mine]

“So you’re not really inserting something that might be foreign to the organism. So it’s something that is a bit, I guess, less concerning for a lot of people who are worried about GMO because that takes away that concern.” [emphasis mine]

“Removing bitterness in a vegetable, I believe, is doing a disservice to our palate,” Dionisia Roman-Osicki of Virden, Man., wrote to The Current. “You can’t be a foodie without recognizing the value of bitterness in food.”

Organic farmer Antony John said there are already “cultural methods” to sweeten the taste and nutritional values of certain foods without genetic modification, such as carrots.

“The cold temperatures causes the carrots to provide an antifreeze, and that antifreeze is sugar,” said John, co-owner of the Soiled Reputation farm in Sebringville, Ont. “So they convert the starch in their roots into sugars. So letting your carrots grow when it’s cold and when there’s subzero temperatures will enhance the sugar in it.”

The radio segment embedded in Rachini’s May 18, 2023 article is 13 mins. 14 secs.

Allergen-free eggs

Over at Hiroshima University, a May 17, 2023 press release (also on EurekAlert but published May 16, 2023) announces research into making eggs safer for people who have allergies, Note 1: The researchers have used a different kind of gene-editing (or genome-editing) technique Note 2: Links have been removed,

Researchers have developed a chicken egg that may be safe for people with egg white allergies. Chicken egg allergies are one of the most common allergies in children. Though most children outgrow this allergy by age 16, some will still have an egg allergy into adulthood. Egg white allergies can cause a variety of symptoms, including vomiting, stomach cramps, breathing problems, hives, and swelling and some people with egg white allergies are unable to receive certain flu vaccines.

Using genome editing technology, researchers have produced an egg without the protein that causes egg white allergies. This protein, called ovomucoid, accounts for approximately 11% of all the protein in egg whites.

Research detailing the food safety profile of this modified egg, called the OVM-knockout, was detailed in a paper published in Food and Chemical Toxicology in April 2023.

“To use OVM-knockout chicken eggs as food, it is important to evaluate its safety as food. In this study, we examined the presence or absence of mutant protein expression, vector sequence insertion, and off-target effects in chickens knocked out with OVM by platinum transcription activator-like effector nucleases (TALENs),” said Ryo Ezaki, an assistant professor at the Graduate School of Integrated Sciences for Life at Hiroshima University in Hiroshima, Japan. TALENs are restriction enzymes that recognize specific DNA sequences and break or cut them.

In order to develop the OVM-knockout eggs, researchers needed to detect and eliminate the ovomucoid protein in the egg whites. TALENs were engineered to target a piece of RNA called exon 1, which codes for specific proteins. The eggs produced from this technique were then tested to ensure there was no ovomucoid protein, mutant ovomucoid protein, or other off-target effects. The eggs had the desired frameshift mutation, which is a mutation created by inserting or deleting nucleotide bases in a gene, and none of them expressed mature ovomucoid proteins. Anti-ovomucoid and anti-mutant ovomucoid antibodies were used to detect any traces of the protein, but there was no evidence of ovomucoid in the eggs. This means that mutant ovomucoids could not create new allergens. This is an important step in determining the safety profile of the eggs.

Other gene editing tools, such as CRISPR, tend to have off-target mutagenesis effects. This means that new mutations are prompted by the gene editing process. However, whole genome sequencing of the altered egg whites showed mutations, which were possibly off-target effects, were not localized to the protein-coding regions.

“The eggs laid by homozygous OVM-knockout hens showed no evident abnormalities. The albumen contained neither the mature OVM nor the OVM-truncated variant,” said Ezaki. “The potential TALEN-induced off-target effects in OVM-knockout chickens were localized in the intergenic and intron regions. Plasmid vectors used for genome editing were only transiently present and did not integrate into the genome of edited chickens. These results indicate the importance of safety evaluations and reveal that the eggs laid by this OVM knockout chicken solve the allergy problem in food and vaccines.”

Looking ahead, researchers will continue to verify the safety profile of the OVM-knockout eggs. Because some people are highly allergic to this specific protein, even small amounts of ovomucoid can cause a reaction. Researchers will need to perform additional immunological and clinical studies to determine the safety of the OVM-knockout eggs. At this time, researchers have determined that OVM-knockout eggs are less allergenic than standard eggs and can be safely used in heat-processed foods that patients with egg allergies can eat. “The next phase of research will be to evaluate the physical properties and processing suitability of OVM-knockout eggs, and to confirm their efficacy through clinical trials,” said Ezaki. “We will continue to conduct further research toward the practical application of allergy-reduced eggs.”

Here’s a link to and a citation for the paper,

Transcription activator-like effector nuclease-mediated deletion safely eliminates the major egg allergen ovomucoid in chickens by Ryo Ezaki, Tetsushi Sakuma, Daisuke Kodama, Ryou Sasahara, Taichi Shiraogawa, Kennosuke Ichikawa, Mei Matsuzaki, Akihiro Handa, Takashi Yamamoto & Hiroyuki Horiuchi. Food and Chemical Toxicology Volume 175, May 2023, 113703 DOI: https://doi.org/10.1016/j.fct.2023.113703

This paper is open access.

A trio of nano news items from Japan (Irago Conference 2015, novel tuneable metallofullerenes, and nanoislands and skeletal skin for fuel cells)

Getting onto a list for news releases from Japan has been a boon. I don’t know how it happened but now I can better keep up with the nanotechnology effort in the country where the term was first coined (Norio Taniguchi) and which is a research leader in this field.

Irago Conference

This is a very intriguing conference, from a joint Oct. 18, 2015 Toyohashi University of Technology and University of Electro-Communications press release,

Organized by the Toyohashi University of Technology and University of Electro-Communications, Tokyo, the Irago Conference aims to enhance mutual understanding between scientists, engineers, policy makers, and experts from a wide spectrum of pure and applied sciences in order to resolve major global issues.

The Irago Conference 2015 is a unique conference combining thought provoking insights into global issues including disaster mitigation, neuroscience, public health monitoring, and nanotechnology [emphasis mine] by internationally renowned invited speakers with selected talks, posters, and demonstrations from academics, industrialists, and think tanks. The conference is truly a ‘360 degree outlook on critical scientific and technological challenges’ facing mankind.

Recent changes in global economics and industrial priorities, environmental and energy policies, food production and population movements have produced formidable challenges that must be addressed for sustaining life on earth.

The Irago Conference will highlight the major issues by bringing together experts from across the world who will give their views on key areas such as energy and natural resources, medicine and public health, disaster prevention and management, as well as other advances in science, technology and life sciences.

Observation, measurement, and monitoring are the keywords of the core topics covered at Irago 2015 with invited speakers Professor Masashi Hayakawa (University of Electro-Communications, Japan) presenting his pioneering research on “Earthquake prediction with electromagnetic phenomena, and Nobuhiko Okabe  (Kawasaki City Institute for Public Health, Japan) discussing “The role and contribution of Kawasaki City Institute for Public Health (Local Public Health Laboratory), locally and globally” with first hand examples of monitoring food safety and the spread of possible diseases carried by insects.

The Irago Conference will be streamed live. Visit the conference website for the links to the streaming site.

http://iragoconference.jp/

When: Thursday, 22 October 2015 to Friday 23  October 2015.

Where: Irago Sea-Park & Spa Hotel, Tahara, Aichi, Japan

They don’t appear to have set up the streaming link yet.

Tuneable metallofullerenes

Originally issued as a Sept. 21, 2015 press release, the University of Electro-Communications has issued an Oct. 19, 2015 version,

Tiny nanoscale molecules in the form of spherical carbon cages, or ‘fullerenes’, have received considerable attention in recent years. Individual or small groups of atoms can be trapped inside fullerenes, creating stable molecules with unique electronic structures and unusual properties that can be exploited in the field of nanomaterials and biomedical science.

Endohedral metallofullerenes (EMFs) are one such class of molecules, in which one or more metal atoms are encapsulated inside many kinds of carbon cages. Crucially, the metal atom(s) are not chemically bonded with the carbon surrounds, but they do donate electrons to the carbon cage. Scientists have recently begun to understand how to control the movement, behavior and positioning of the enclosed atoms by adding other atoms, such as silicon or germanium (in their silyl or germyl groups), to the fullerene surface. This allows for the manipulation and fine-tuning of the EMF’s properties.

Now, Masahiro Kako and co-workers at the University of Electro-Communications in Tokyo, together with scientists across Japan and the USA, have created and analyzed the effects of silylation and germylation on an EMF called Lu3N@Ih-C80 (three lutetium atoms bonded to a nitrogen atom encased inside a carbon 80 cage).

Using X-ray crystallography, electrochemical analyses and theoretical calculations, the team discovered that adding silyl groups or germyl groups to the fullerene structure was a versatile way of controlling the EMF’s electronic properties. The exact positioning of the silyl or germyl groups in bonding to the carbon structure determined the energy gaps present in the EMF, and determined the orientation of the bonded metal atoms inside the cage.

The germyl groups donated more electrons and the process worked slightly more efficiently than the silyl groups, but Kako and his team believe that both provide an effective way of fine-tuning EMF electronic characteristics.

Background

A brief history of fullerenes

Fullerenes are carbon molecules that take the shape of spheres. The most famous and abundant fullerene is the buckminsterfullerene, or ‘buckyball’, C60, which resembles a soccer ball in shape with a bonded carbon atom at each point of every polygon.

Endohedral metallofullerenes, or EMFs, are created by trapping a metal atom or atoms inside a fullerene cage, rather like a hamster in a ball. The trapped atom(s) are not chemically-bonded to the carbon, but they do interact with it by donating electrons, thus creating unique and very useful molecules for nanomaterial science and biomedicine.

Silylation and germylation

The addition of other atoms to fullerene surfaces can affect EMF properties, by regulating the behavior of the metal atoms inside the fullerene cage. In one EMF, the movement of lanthanum atoms is restricted to two dimensions by the addition of silyl groups to the carbon cage. This alters the electrostatic potentials inside the cage and restricts the lanthanum atoms’ mobility, and thus changes the overall properties of the whole molecule.

This study by Masahiro Kako and co-workers further enhances understanding of the effects of silylation and germalytion (the addition of silicon-based and germanium-based groups) on lutetium-based EMFs. The team have shown that the exact positioning of the additional atoms in the carbon structure can influence the energy gaps across the molecule, thereby allowing them to tune the electronic properties of the EMF. This ability to ‘fine-tune’ EMFs could have some applications for functional materials in molecular electronics, such as acceptors in organic photovoltaic devices.

Further work

Kako and his team hope to carry out further investigations into the addition of alternative groups of atoms to fullerenes, to add to the tuning properties of silicon- and germanium-based groups. This could expand on the versatility of EMFs and their potential applications in future.

Fullerenes don’t get that much attention these days when compared to graphene and carbon nanotubes although there seems to be increasing interest in their potential as cages.

Here’s a link to and a citation for the paper,

Preparation, Structural Determination, and Characterization of Electronic Properties of Bis-Silylated and Bis-Germylated Lu3N@Ih-C80 by Prof. Dr. Masahiro Kako, Kyosuke Miyabe, Dr. Kumiko Sato, Dr. Mitsuaki Suzuki, Dr. Naomi Mizorogi, Dr. Wei-Wei Wang, Prof. Dr. Michio Yamada, Prof. Dr. Yutaka Maeda, Prof. Dr. Marilyn M. Olmstead, Prof. Dr. Alan L. Balch, Prof. Dr. Shigeru Nagase, and Prof. Dr. Takeshi Akasaka. Chemistry – A European Journal DOI: 10.1002/chem.201503579 Article first published online: 21 SEP 2015

© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim

Nanoislands and skeletal skin for fuel cells

This final item concerns a platinum ‘skin’. From an Oct. 21, 2015 University of Electro-Communications press release,

Polymer electrolyte fuel cells (PEFC) could provide an alternative to traditional fossil fuel power, but higher performance and durability under harsh conditions are needed before PEFC vehicles can be considered commercially viable. Now researchers at the University of Electro-Communications, the University of Tokushima and Japan Synchrotron Radiation Research Institute in Japan have synthesised catalysts from platinum cobalt (PtCo3) nanoparticles on carbon (C) with tin oxide (SnO2) nanoislands and shown that they perform better than any previously reported.

Fuel cell research has focused on platinum alloys and transition metal oxides to improve on the durability and catalytic performance of platinum on carbon. Previous work with SnO2 islands grown on platinum tin alloy with carbon had already shown some improvement in the oxygen reduction reactions that occur in fuel cells. However growing islands of only SnO2 on other alloys posed a challenge.

Now Yasuhiro Iwasawa at the University of Electro-Communications and his colleagues have grown SnO2 islands on Pt3Co nanoparticles on carbon (Pt3Co/C) by selective electrochemical deposition of tin metal, which is then oxidized. The addition of the SnO2 nanoislands doubled the catalytic performance of the Pt3Co/C catalysts. In addition they were undamaged after undergoing 5000 cycles of voltage changes to test their durability.

The structure the Pt3Co nanoparticles form has a Pt3Co core surrounded by a platinum skin that has a rough – “skeleton” – morphology. The researchers attribute the high catalytic performance in part to efficient electronic modification specifically at the platinum skin surface, and in particular to the unique property of the SnO2 nanoislands at the compressive platinum skeleton-skin surface.

“In general, adhesion of transition metal oxides on carbon induces depression of the electrical conductivity of the carbon,” explain the researchers in their report. “Hence, the selective nano-SnO2 decoration on the Pt-enriched-surface nanoparticles provides a significant advantage as a cathode catalyst.”

Background

Polymer electrolyte fuel cells

Polymer electrolyte fuel cells consist of two porous polymer membranes. On one side hydrogen gas molecules give up electrons and on the other oxygen gas molecules accept electrons completing a current circuit.  The ions can then penetrate the membrane and combine to form water.

Polymer electrolyte fuel cells have several advantages over conventional fuel as they do not deplete the limited supplies of fossil fuels, and the waste products are water and heat, and therefore relatively non-polluting. The efficiency of fuel cells has already highlighted their potential for powering small vehicles.

Redox

The formation of hydrogen and oxygen ions from the gas molecules are referred to as redox reactions from the term ‘reduction’ and ‘oxidation’. In fuel cells neutral oxygen molecules are reduced to negatively charge oxygen ions with a charge of -2. The oxidation number is thus ‘reduced’ from 0 to -2. In contrast, ionisation of hydrogen molecules to positively charge hydrogen ions (that is single protons) increases the oxygen number by one – ‘oxidation’.

Catalysts are used to increase the efficiency of the redox reactions in fuel cells to improve the power and current density. The efficiency of the catalysts is measured in terms of the oxygen reduction reaction (ORR) activity.

Improving ORR

The researchers measured the potential difference required for other reactions in the presence of their catalyst to determine how the additional SnO2 islands improved the ORR. Their observations suggest that strain at the nanoislands on the Pt3Co nanoparticles modifies the electronic structure so that the centre of the electron d band is decreased. This decreases oxygen adsorption and improves the performance of the catalyst. In addition there is an increase in the proton affinity of the platinum near the nanoislands, which significantly enhances the ORR further still.

Here’s a link to and a citation for the paper,

Surface-Regulated Nano-SnO2/Pt3Co/C Cathode Catalysts for Polymer Electrolyte Fuel Cells Fabricated by a Selective Electrochemical Sn Deposition Method by Kensaku Nagasawa, Shinobu Takao, Shin-ichi Nagamatsu, Gabor Samjeské, Oki Sekizawa, Takuma Kaneko, Kotaro Higashi, Takashi Yamamoto, Tomoya Uruga†, and Yasuhiro Iwasawa. J. Am. Chem. Soc., 2015, 137 (40), pp 12856–12864 DOI: 10.1021/jacs.5b04256 Publication Date (Web): September 27, 2015

Copyright © 2015 American Chemical Society

This paper is behind a paywall.