Tag Archives: Tiny sponges lure coronavirus away from lung cells

‘Nanotraps’ for catching and destroying coronavirus

‘Nanotraps’ are not vaccines although they do call the immune system into play. They represent a different way for dealing with COVID-19. (This work reminds of my June 24, 2020 posting Tiny sponges lure coronavirus away from lung cells where the researchers have a similar approach with what they call ‘nanosponges’.)

An April 27, 2021 news item on Nanowerk makes the announcement,

Researchers at the Pritzker School of Molecular Engineering (PME) at the University of Chicago have designed a completely novel potential treatment for COVID-19: nanoparticles that capture SARS-CoV-2 viruses within the body and then use the body’s own immune system to destroy it.

These “Nanotraps” attract the virus by mimicking the target cells the virus infects. When the virus binds to the Nanotraps, the traps then sequester the virus from other cells and target it for destruction by the immune system.

In theory, these Nanotraps could also be used on variants of the virus, leading to a potential new way to inhibit the virus going forward. Though the therapy remains in early stages of testing, the researchers envision it could be administered via a nasal spray as a treatment for COVID-19.

A scanning electron microscope image of a nanotrap (orange) binding a simulated SARS-CoV-2 virus (dots in green). Scientists at the University of Chicago created these nanoparticles as a potential treatment for COVID-19. Image courtesy Chen and Rosenberg et al.

An April 27, 2021 University of Chicago news release (also on EurekAlert) by Emily Ayshford, which originated the news item, describes the work in more detail,

“Since the pandemic began, our research team has been developing this new way to treat COVID-19,” said Asst. Prof. Jun Huang, whose lab led the research. “We have done rigorous testing to prove that these Nanotraps work, and we are excited about their potential.”

Designing the perfect trap

To design the Nanotrap, the research team – led by postdoctoral scholar Min Chen and graduate student Jill Rosenberg – looked into the mechanism SARS-CoV-2 uses to bind to cells: a spike-like protein on its surface that binds to a human cell’s ACE2 receptor protein.

To create a trap that would bind to the virus in the same way, they designed nanoparticles with a high density of ACE2 proteins on their surface. Similarly, they designed other nanoparticles with neutralizing antibodies on their surfaces. (These antibodies are created inside the body when someone is infected and are designed to latch onto the coronavirus in various ways).

Both ACE2 proteins and neutralizing antibodies have been used in treatments for COVID-19, but by attaching them to nanoparticles, the researchers created an even more robust system for trapping and eliminating the virus.

Made of FDA [US Food and Drug Administration]-approved polymers and phospholipids, the nanoparticles are about 500 nanometers in diameter – much smaller than a cell. That means the Nanotraps can reach more areas inside the body and more effectively trap the virus.

The researchers tested the safety of the system in a mouse model and found no toxicity. They then tested the Nanotraps against a pseudovirus – a less potent model of a virus that doesn’t replicate – in human lung cells in tissue culture plates and found that they completely blocked entry into the cells.

Once the pseudovirus bound itself to the nanoparticle – which in tests took about 10 minutes after injection – the nanoparticles used a molecule that calls the body’s macrophages to engulf and degrade the Nanotrap. Macrophages will generally eat nanoparticles within the body, but the Nanotrap molecule speeds up the process. The nanoparticles were cleared and degraded within 48 hours.

The researchers also tested the nanoparticles with a pseudovirus in an ex vivo lung perfusion system – a pair of donated lungs that is kept alive with a ventilator – and found that they completely blocked infection in the lungs.

They also collaborated with researchers at Argonne National Laboratory to test the Nanotraps with a live virus (rather than a pseudovirus) in an in vitro system. They found that their system inhibited the virus 10 times better than neutralizing antibodies or soluble ACE2 alone.

A potential future treatment for COVID-19 and beyond

Next the researchers hope to further test the system, including more tests with a live virus and on the many virus variants.

“That’s what is so powerful about this Nanotrap,” Rosenberg said. “It’s easily modulated. We can switch out different antibodies or proteins or target different immune cells, based on what we need with new variants.”

The Nanotraps can be stored in a standard freezer and could ultimately be given via an intranasal spray, which would place them directly in the respiratory system and make them most effective.

The researchers say it is also possible to serve as a vaccine by optimizing the Nanotrap formulation, creating an ultimate therapeutic system for the virus.

“This is the starting point,” Huang said. “We want to do something to help the world.”

The research involved collaborators across departments, including chemistry, biology, and medicine.

Here’s a link to and a citation for the paper,

Nanotraps for the containment and clearance of SARS-CoV-2 by Min Chen, Jillian Rosenberg, Xiaolei Cai, Andy Chao Hsuan Lee, Jiuyun Shi, Mindy Nguyen, Thirushan Wignakumar, Vikranth Mirle, Arianna Joy Edobor, John Fung, Jessica Scott Donington, Kumaran Shanmugarajah, Yiliang Lin, Eugene Chang, Glenn Randall, Pablo Penaloza-MacMaster, Bozhi Tian, Maria Lucia Madariaga, Jun Huang. Matter, April 19, 2021, DOI: https://doi.org/10.1016/j.matt.2021.04.005

This paper appears to be open access.

A look back at 2020 on this blog and a welcome to 2021

Things past

A year later i still don’t know what came over me but I got the idea that I could write a 10-year (2010 – 2019) review of science culture in Canada during the last few days of 2019. Somehow two and half months later, I managed to publish my 25,000+ multi-part series.

Plus,

Sadly, 2020 started on a somber note with this January 13, 2020 posting, In memory of those in the science, engineering, or technology communities returning to or coming to live or study in Canada on Flight PS752.

COVID-19 was mentioned and featured here a number of times throughout the year. I’m highlighting two of those postings. The first is a June 24, 2020 posting titled, Tiny sponges lure coronavirus away from lung cells. It’s a therapeutic approach that is not a vaccine but a way of neutralizing the virus. The idea is that the nanosponge is coated in the material that the virus seeks in a human cell. Once the virus locks onto the sponge, it is unable to seek out cells. If I remember rightly, the sponges along with the virus are disposed of by the body’s usual processes.

The second COVID-19 posting I’m highlighting is my first ever accepted editorial opinion by the Canadian Science Policy Centre (CSPC). I republished the piece here in a May 15, 2020 posting, which included all of my references. However, the magazine version is more attractively displayed in the CSPC Featured Editorial Series Volume 1, Issue 2, May 2020 PDF on pp. 31-2.

Artist Joseph Nechvatal reached out to me earlier this year regarding his viral symphOny (2006-2008), a 1 hour 40 minute collaborative electronic noise music symphony. It was featured in an April 7, 2020 posting which seemed strangely à propos during a pandemic even though the work was focused on viral artificial life. You can access it for free https://archive.org/details/ViralSymphony but the Internet Archive where this is stored is requesting donations.

Also on a vaguely related COVID-19 note, there’s my December 7, 2020 posting titled, Digital aromas? And a potpourri of ‘scents and sensibility’. As any regular readers may know, I have a longstanding interest in scent and fragrances. The COVID-19 part of the posting (it’s not about losing your sense of smell) is in the subsection titled, Smelling like an old book. Apparently some folks are missing the smell of bookstores and Powell’s books have responded to that need with a new fragrance.

For anyone who may have missed it, I wrote an update of the CRISPR twin affair in my July 28, 2020 posting, titled, July 2020 update on Dr. He Jiankui (the CRISPR twins) situation.

Finishing off with 2020, I wrote a commentary (mostly focused on the Canada chapter) about a book titled, Communicating Science: A Global Perspective in my December 10, 2020 posting. The book offers science communication perspectives from 39 different countries.

Things future

I have no doubt there will be delights ahead but as they are in the realm of discovery and, at this point, they are currently unknown.

My future plans include a posting about trust and governance. This has come about since writing my Dec. 29, 2020 posting titled, “Governments need to tell us when and how they’re using AI (artificial intelligence) algorithms to make decisions” and stumbling across a reference to a December 15, 2020 article by Dr. Andrew Maynard titled, Why Trustworthiness Matters in Building Global Futures. Maynard’s focus was on a newly published report titled, Trust & Tech Governance.

I will also be considering the problematic aspects of science communication and my own shortcomings. On the heels of reading more than usually forthright discussions of racism in Canada across multiple media platforms, I was horrified to discover I had featured, without any caveats, work by a man who was deeply problematic with regard to his beliefs about race. He was a eugenicist, as well as, a zoologist, naturalist, philosopher, physician, professor, marine biologist, and artist who coined many terms in biology, including ecology, phylum, phylogeny, and Protista; see his Wikipedia entry.

A Dec. 23, 2020 news release on EurekAlert (Scientists at Tel Aviv University develop new gene therapy for deafness) and a December 2020 article by Sarah Zhang for The Atlantic about prenatal testing and who gets born have me wanting to further explore the field of how genetic testing and therapies will affect our concepts of ‘normality’. Fingers crossed I’ll be able to get Dr. Gregor Wolbring to answer a few questions for publication here. (Gregor is a tenured associate professor [in Alberta, Canada] at the University of Calgary’s Cumming School of Medicine and a scholar in the field of ‘ableism’. He is deeply knowledgeable about notions of ability vs disability.)

As 2021 looms, I’m hopeful that I’ll be featuring more art/sci (or sciart) postings, which is my segue to a more hopeful note about 2021 will bring us,

The Knobbed Russet has a rough exterior, with creamy insides. Photo courtesy of William Mullan.

It’s an apple! This is one of the many images embedded in Annie Ewbank’s January 6, 2020 article about rare and beautiful apples for Atlas Obscura (featured on getpocket.com),

In early 2020, inside a bright Brooklyn gallery that is plastered in photographs of apples, William Mullan is being besieged with questions.

A writer is researching apples for his novel set in post-World War II New York. An employee of a fruit-delivery company, who covetously eyes the round table on which Mullan has artfully arranged apples, asks where to buy his artwork.

But these aren’t your Granny Smith’s apples. A handful of Knobbed Russets slumping on the table resemble rotting masses. Despite their brown, wrinkly folds, they’re ripe, with clean white interiors. Another, the small Roberts Crab, when sliced by Mullan through the middle to show its vermillion flesh, looks less like an apple than a Bing cherry. The entire lineup consists of apples assembled by Mullan, who, by publishing his fruit photographs in a book and on Instagram, is putting the glorious diversity of apples in the limelight.

Do go and enjoy! Happy 2021!