Tag Archives: Kent State University.

Nanoscientists speculate that artificial life forms could be medicine of the future

Even after all these years, my jaw is still capable of dropping but then I read the details. This looks a lot like ‘medical nanobots’ which researchers have been talking about for a long time. Nice twist on a familiar theme. From an October 5, 2023 news item on ScienceDaily,

Imagine a life form that doesn’t resemble any of the organisms found on the tree of life. One that has its own unique control system, and that a doctor would want to send into your body. It sounds like a science fiction movie, but according to nanoscientists, it can—and should—happen in the future.

Creating artificial life is a recurring theme in both science and popular literature, where it conjures images of creeping slime creatures with malevolent intentions or super-cute designer pets. At the same time, the question arises: What role should artificial life play in our environment here on Earth, where all life forms are created by nature and have their own place and purpose?

Associate professor Chenguang Lou from the Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, together with Professor Hanbin Mao from Kent State University, is the parent of a special artificial hybrid molecule that could lead to the creation of artificial life forms. They have now published a review in the journal Cell Reports Physical Science on the state of research in the field behind their creation. The field is called “hybrid peptide-DNA nanostructures,” and it is an emerging field, less than ten years old.

An October 5, 2023 University of Southern Denmark press release (also on EurekAlert) by Birgitte Svennevig, which originated the news item, shares the researcher’s (Chenguang Lou) vision for the research and more technical details about “hybrid peptide-DNA nanostructures” along with other international research efforts,

Lou’s vision is to create viral vaccines (modified and weakened versions of a virus) and artificial life forms that can be used for diagnosing and treating diseases.

“In nature, most organisms have natural enemies, but some do not. For example, some disease-causing viruses have no natural enemy. It would be a logical step to create an artificial life form that could become an enemy to them,” he says.

Similarly, he envisions such artificial life forms can act as vaccines against viral infection and can be used as nanorobots [also known as nanobots] or nanomachines loaded with medication or diagnostic elements and sent into a patient’s body.

“An artificial viral vaccine may be about 10 years away. An artificial cell, on the other hand, is on the horizon because it consists of many elements that need to be controlled before we can start building with them. But with the knowledge we have, there is, in principle, no hindrance to produce artificial cellular organisms in the future,” he says.

What are the building blocks that Lou and his colleagues in this field will use to create viral vaccines and artificial life? DNA and peptides are some of the most important biomolecules in nature, making DNA technology and peptide technology the two most powerful molecular tools in the nanotechnological toolkit today. DNA technology provides precise control over programming, from the atomic level to the macro level, but it can only provide limited chemical functions since it only has four bases: A, C, G, and T. Peptide technology, on the other hand, can provide sufficient chemical functions on a large scale, as there are 20 amino acids to work with. Nature uses both DNA and peptides to build various protein factories found in cells, allowing them to evolve into organisms.

Recently, Hanbin Mao and Chenguang Lou have succeeded in linking designed three-stranded DNA structures with three-stranded peptide structures, thus creating an artificial hybrid molecule that combines the strengths of both. This work was published in Nature Communications in 2022. (read the article here “Chirality transmission in macromolecular domains” and the press release at https://www.sdu.dk/en/om_sdu/fakulteterne/naturvidenskab/nyheder-2022/supermolekyle)

Elsewhere in the world, other researchers are also working on connecting DNA and peptides because this connection forms a strong foundation for the development of more advanced biological entities and life forms.

At Oxford University, researchers have succeeded in building a nanomachine made of DNA and peptides that can drill through a cell membrane, creating an artificial membrane channel through which small molecules can pass. (Spruijt et al., Nat. Nanotechnol. 2018, 13, 739-745)

At Arizona State University, Nicholas Stephanopoulos and colleagues have enabled DNA and peptides to self-assemble into 2D and 3D structures. (Buchberger et al., J. Am. Chem. Soc. 2020, 142, 1406-1416)

At Northwest University [Northwestern University?], researchers have shown that microfibers can form in conjunction with DNA and peptides self-assembling. DNA and peptides operate at the nano level, so when considering the size differences, microfibers are huge. (Freeman et al., Science, 2018, 362, 808-813)

At Ben-Gurion University of the Negev, scientists have used hybrid molecules to create an onion-like spherical structure containing cancer medication, which holds promise to be used in the body to target cancerous tumors. (Chotera et al., Chem. Eur. J., 2018, 24, 10128-10135)

“In my view, the overall value of all these efforts is that they can be used to improve society’s ability to diagnose and treat sick people. Looking forward, I will not be surprised that one day we can arbitrarily create hybrid nanomachines, viral vaccines and even artificial life forms from these building blocks to help the society to combat those difficult-to-cure diseases. It would be a revolution in healthcare,” says Chenguang Lou.

Here’s a link to and a citation for the latest paper,

Peptide-DNA conjugates as building blocks for de novo design of hybrid nanostructures by Mathias Bogetoft Danielsen, Hanbin Mao, Chenguang Lou. Cell Reports Physical Science Volume 4, Issue 10, 18 October 2023, 101620 DOI: https://doi.org/10.1016/j.xcrp.2023.101620

This paper is open access.

‘Giving’ life to liquid crystals

A Feb. 18, 2014 news item on Azonano highlights a presentation about living liquid crystals that was given at the 58th annual Biophysical Society Meeting in San Francisco on Feb. 17, 2014,

Plop living, swimming bacteria into a novel water-based, nontoxic liquid crystal and a new physics takes over. The dynamic interaction of the bacteria with the liquid crystal creates a novel form of soft matter: living liquid crystal.

The new type of active material, which holds promise for improving the early detection of diseases, was developed by a research collaboration based at Ohio’s Kent State University and Illinois’ Argonne National Laboratory. The team will present their work at the 58th annual Biophysical Society Meeting, held in San Francisco, Feb.15-19 [2014].

ScienceDaily featured the story in a Feb. 17, 2014 news item,

As a biomechanical hybrid, living liquid crystal moves and reshapes itself in response to external stimuli. It also stores energy just as living organisms do to drive its internal motion. And it possesses highly desirable optical properties. In a living liquid crystal system, with the aid of a simple polarizing microscope, you can see with unusual clarity the wake-like trail stimulated by the rotation of bacterial flagella just 24-nanometers thick, about 1/4000th the thickness of an average human hair.

You can also control and guide active movements of the bacteria by manipulating variables such as oxygen availability, temperature or surface alignment, thus introducing a new design concept for creating microfluidic biological sensors. Living liquid crystal provides a medium to amplify tiny reactions that occur at the micro- and nano-scales — where molecules and viruses interact — and to also easily optically detect and analyze these reactions. That suits living liquid crystal to making sensing devices that monitor biological processes such as cancer growth, or infection. Such microfluidic technology is of increasing importance to biomedical sensing as a means of detecting disease in its earliest stages when it is most treatable, and most cost-effectively managed.

Quotes from the lead researcher and presentation details can be found in the Feb. 17, 2013 news item on newswise.com,

“As far as we know, these things have never been done systematically as we did before in experimental physics,” explained Shuang Zhou, a Ph.D. candidate at Ohio’s Kent State University. He collaborated on the project with Oleg Lavrentovich of Kent State, Andrey Sokolov of Argonne National Laboratory, in Illinois, and Igor Aranson of Argonne National Laboratory and Northwestern University, in Evanston, Ill.

“There are many potential applications for this kind of new material, but some of the more immediate are new approaches to biomedical sensing design,” Zhou said. He likens the current investigation to the “first handful of gold scooped out of a just-opened treasure chest. There are many more things to be done.”

The presentation “Living Liquid Crystals” by Shuang Zhou, Andrey Sokolov, Oleg D. Lavrentovich and Igor S. Aranson will be at 1:45 p.m. on Monday, February 17, 2014 in Hall D in San Francisco’s Moscone Convention Center.
ABSTRACT: http://tinyurl.com/pmvbfbp

Here’s the presentation abstract (from the abstractsonline website),

Bio-mechanical hybrids are an emerging class of engineered composite soft materials with the ability to move and reconfigure their structure and properties in response to external stimuli. Similar to their biological counterparts, they can transduce energy stored in the environment to drive systematic movements. This functionality is critical for a variety of applications, from bioinspired micromachines and sensors to self-assembled microrobots. Here, by combining two seemingly incompatible concepts, living swimming bacteria and inanimate but orientationally ordered lyotropic liquid crystal, we conceive a fundamentally new class of matter – living liquid crystals (LLCs). LLCs can be actuated and controlled by the amount of oxygen available to bacteria, by concentration of ingredients or by the temperature. Our studies reveal a wealth of intriguing phenomena, caused primarily by the coupling between the activity-triggered flows and director reorientations. Among these are (a) coupling between the orientation and degree of order of LLC and the bacterial motion, (b) local nematic-isotropic phase transition caused by the bacteria-produced shear flows, (c) periodic stripe instabilities of the director in surface-anchored LLCs, (d) director pattern evolution into an array of disclinations with positive and negative topological charges as the surface anchoring is weakened or when the bacterial activity is enhanced; (e) direct optical visualization and quantitative characterization of microflows generated by the nanometers-thick bacterial flagella by the birefringent LLC medium. Our work suggests an unorthodox design concept of reconfigurable microfluidic chambers for control and manipulation of bacteria. Besides an obvious importance to active matter, our studies can result in valuable biosensing and biomedical applications.

The researchers associated with this work are,

Shuang Zhou, Andrey Sokolov, Oleg D. Lavrentovich, Igor S. Aranson

Their research has been published online by the Proceedings of the National Academy of Sciences (PNAS),

Living liquid crystals by Shuang Zhou, Andrey Sokolov, Oleg D. Lavrentovich, and Igor S. Aranson. PNAS approved December 12, 2013 (received for review November 22, 2013) doi: 10.1073/pnas.1321926111

This paper is behind a paywall but it can be accessed via the tabs seen directly after the publication history (approved … received …).  You will see Abstract, Authors, … and two symbols signifying the formats in which the paper is available.