Tag Archives: Radboud University

Regenerate damaged skin, cartilage, and bone with help from silkworms?

A July 24, 2024 news item on phys.org highlights research into regenerating bone and skin, Note: A link has been removed,

Researchers are exploring new nature-based solutions to stimulate skin and bone repair.

In the cities of Trento and Rovereto in northern Italy and Bangkok in Thailand, scientists are busy rearing silkworms in nurseries. They’re hoping that the caterpillars’ silk can regenerate human tissue. For such a delicate medical procedure, only thoroughbreds will do.

“By changing the silkworm, you can change the chemistry,” said Professor Antonella Motta, a researcher in bioengineering at the University of Trento in Italy. That could, in turn, affect clinical outcomes. “This means the quality control should be very strict.”

Silk has been used in surgical sutures for hundreds of years and is now emerging as a promising nature-based option for triggering human tissue to self-regenerate. Researchers are also studying crab, shrimp and mussel shells and squid skin and bone for methods of restoring skin, bone and cartilage. This is particularly relevant as populations age.

A July 23, 2024 article by Gareth Willmer for Horizon Magazine, the EU (European Union) research & innovation magazine, which originated the news item, provides more details,

‘Tissue engineering is a new strategy to solve problems caused by pathologies or trauma to the organs, as an alternative to transplants or artificial device implantations,’ said Motta, noting that these interventions can often fail or expire. ‘The idea is to use the natural ability of our bodies to rebuild the tissue.’

The research forms part of the five-year EU-funded SHIFT [Shaping Innovative Designs for Sustainable Tissue Engineering Products] project that Motta coordinates, which includes universities in Europe, as well as partners in Asia and Australia. Running until 2026, the research team aim to scale up methods for regenerating skin, bone and cartilage using bio-based polymers and to get them ready for clinical trials. The goal is to make them capable of repairing larger wounds and tissue damage.

The research builds on work carried out under the earlier REMIX [Regenerative Medicine Innovation Crossing – Research and Innovation Staff Exchange in Regenerative Medicine] project, also funded by the EU, which made important advances in understanding the different ways in which these biomaterials could be used. 

Building a scaffold

Silk, for instance, can be used to form a “scaffold” in damaged tissue that then activates cells to form new tissue and blood vessels. The process could be used to treat conditions such as diabetic ulcers and lower back pain caused by spinal disc degeneration. The SHIFT team have been exploring minimally invasive procedures for treatment, such as hydrogels that can be applied directly to the skin, or injected into bone or cartilage.

The approaches using both silkworms and some of the marine organisms have great potential, said Motta. 

‘We have three or four systems with different materials that are really promising,’ she said. By the end of SHIFT, the goal is to have two or three prototypes that can be developed together with start-up and spin-off companies created in collaboration with the project. 

One of the principles of the SHIFT team has been been exploring how best to harness the concept of a circular economy. For example, they are looking into how waste products from the textile and food industries can be reused in these treatments.

Yet with complicated interactions at a microscale, and the need to prevent the body from rejecting foreign materials, such tissue engineering is a big challenge. 

‘The complexity is high because the nature of biology is not easy,’ said Motta. ‘We cannot change the language of the cells, but instead have to learn to speak the same language as them.’

But she firmly believes the nature-based rather than synthetic approach is the way to go and thinks treatments harnessing SHIFT’s methods could become available in the early 2030s. 

‘I believe in this approach,’ said Motta. ‘Bone designed by nature is the best bone we can have.’

Skin care

Another EU-funded project known as SkinTERM [Skin Tissue Engineering and Regenerative Medicine: From skin repair to regeneration], which runs for almost five years until mid-2025, is also looking at novel ways to get tissue to self-regenerate, focusing on skin. To treat burns and other surface wounds today, a thin layer of skin is sometimes grafted from another part of the body. This can cause the appearance of disfiguring scars and the patient’s mobility may be impacted when the tissue contracts as it heals. Current skin-grafting methods can also be painful.

The SkinTERM team are therefore investigating how inducing the healing process in the networks of cells surrounding a wound might enable skin to repair itself. 

‘We could do much better if we move towards regeneration,’ said Dr Willeke Daamen, who coordinates SkinTERM as a researcher in soft tissue regeneration at Radboud University in Nijmegen, the Netherlands. ‘The ultimate goal would be to get the same situation before and after being wounded.’

Researchers are studying a particular mammal – the spiny mouse – which has a remarkable ability to heal without scarring. It is able to self-repair damage to other tissues like the heart and spinal cord too. This is also true of early foetal skin.

The team are examining these systems to learn more about how they work and the processes occurring in the area around cells, known as the extracellular matrix. They hope to identify factors that might have a role in the regenerative process, and test how it might be induced in humans. 

Kick-start

‘We’ve been trying to learn from those systems on how to kick-start such processes,’ said Daamen. ‘We’ve made progress in what kinds of compounds seem at least in part to be responsible for a regenerative response.’

Many lines of research are being carried out among a new generation of multidisciplinary scientists being trained in this area, and a lot has already been achieved, said Daamen.

They have managed to create scaffolds using different components related to skin regeneration, such as the proteins collagen and elastin. They have also collected a vast amount of data on genes and proteins with potential roles in regeneration. Their role will be further tested by using them on scar-prone cells cultured on collagen scaffolds.

‘The mechanisms are complex,’ said Dr Bouke Boekema, a senior researcher at the Association of Dutch Burn Centres in Beverwijk, the Netherlands, and vice-coordinator of SkinTERM. 

‘If you find a mechanism, the idea is that maybe you can tune it so that you can stimulate it. But there’s not necessarily one magic bullet.’

By the end of the project next year, Boekema hopes the research could result in some medical biomaterial options to test for clinical use. ‘It would be nice if several prototypes were available for testing to see if they improve outcomes in patients.’

Research in this article was funded by the Marie Skłodowska-Curie Actions (MSCA). The views of the interviewees don’t necessarily reflect those of the European Commission. If you liked this article, please consider sharing it on social media.

Interesting. Over these last few months, I’ve been stumbling across more than my usual number of regenerative medicine stories.

International conference “Living Machines” dedicated to technology inspired by nature in Genoa, Italy (July 10 – 13, 2023)

I love the look and the theme for this “Living Machines” conference, which seems to be water,

A June 28, 2023 Istituto Italiano di Tecnologia (IIT) press release (also on EurekAlert) provides more detail about the conference,

Now in its twelfth year, the international conference “Living Machines”, organised by Istituto Italiano di Tecnologia (Italian Institute of Technology, IIT), returns to Italy and comes to Genoa for the first time, from 10 to 13 July. Around one hundred experts from all over the world are expected, and they will present their achievements in the field of bio-inspired science and technology. The conference will take place in an exceptional venue, the Acquario di Genova (Genoa Aquarium), which, having reached its 30th birthday, is the ideal location at which to bring together various subject areas, from biology to artificial intelligence and robotics, with a focus on sustainability and environmental protection.

The scientific organiser of the event is Barbara Mazzolai, Associate Director for Robotics and head of the Bioinspired Soft Robotics Lab at IIT, along with Fabian Meder, researcher in the Bioinspired Soft Robotics Lab group and co-chair of the conference programme.

The conference will include two events open to the public: an exhibition area, which will be accessible from 11 to 13 July in the afternoon (from 2 to 4.30 pm); and a scientific café, which will take place on the 12 July at 5 pm. The conference will be an opportunity for international guests to appreciate the region’s beauty and talents, and it will also include the participation of students from the Niccolò Paganini Conservatory of Music. In addition, a satellite event of the conference will be the ISPA – Italian Sustainability Photo Award – exhibition, which will open at Palazzo Ducale on 10 July at 6 p.m.

The “Living Machines” conference is the landmark event for the international scientific community which bases its research on living organisms, such as human beings and other animal species – terrestrial, marine, and airborne – in addition to plants, fungi, and bacteria, in order to create so-called “living machines”, in other words, forms of technology capable of replicating their structure and mechanisms of operation.

“The conference is rooted in the union between robotics and neuroscience, using man and other animal species as a model for the study of intelligence and control systems,” said Barbara Mazzolai, Associate Director for Robotics at IIT. “This year the conference will focus on the role of biomimicry in the creation of robots that are more sustainable, with applications for the challenges of environmental protection and human health. Discussions will revolve around the development of robots with a lower energy impact, made using recyclable and biodegradable materials, and that can be used in emergency situations or extreme environments, such as deep sea, soil, space, or environmental disasters, but also for precision agriculture, environmental surveillance, infrastructure monitoring, human care and medical-surgical assistance.

In the conference programme, experts will take part in a first day of parallel workshop and tutorial sessions (on 10 July), during which the topics of bioinspiration and biohybrid technology in the fields of medicine and the marine environment will be addressed. This first day will be followed by three days of plenary sessions, featuring talks by internationally-renowned scientists. More specifically: Oussama Khatib, one of the pioneers of robotics and director of the Robotics Laboratory at Stanford University; Marco Dorigo, professor at the Université Libre de Bruxelles and one of the pioneers of collective intelligence; Peter Fratzl, director of the Max Planck Institute of Colloids and Interfaces, working on research into osteoporosis and tissue regeneration; Eleni Stavrinidou, coordinator of the “Electronic Plants” group at Linköping University and an expert in bioelectronic and biohybrid systems; Olga Speck, Principal Researcher at the University of Freiburg, specialising in biomimetic materials and the regenerative capabilities of plants; and Kyu-Jin Cho, director of the Research Centre for Soft Robotics and the Biorobotics Laboratory at Seoul National University, one of the world’s leading experts on soft robotics.

For conference participants only, the programme includes: a visit to the Acquario, guided by the facility’s scientific staff, who will illustrate the work and practices needed for the protection and conservation of marine species and the undergoing research projects; an exhibition area for prototypes and products by research groups and companies operating in this field; and a dinner at Villa Lo Zerbino, with a musical contribution by students from the Niccolò Paganini Conservatory.

Open to the general public, on 12 July from 5 p.m. to 6 p.m. there will be a round table entitled “Living Machines: The Origin and the Future” chaired by science journalist Nicola Nosengo, Chief Editor of Nature Italy. Speakers will include Cecilia Laschi from the National University of Singapore, Vickie Webster-Wood from Carnegie Mellon University, Thomas Speck from the University of Freiburg and Paul Verschure from Radboud University Nijmegen.

A satellite initiative of the conference will be the exhibition for ISPA, the Italian Sustainability Photo Award, which will open at Palazzo Ducale on 10 July at 6.00 p.m. ISPA is the photographic award created by the Parallelozero agency in cooperation with the main sponsor PIMCO, to raise public awareness of environmental, social, and governance sustainability issues, encapsulated in the acronym ESG. The works of the winning photographers and finalists in the last three editions will be on display in Genoa: a selection of images that depict the emblematic stories of Italy, a nation moving towards a more sustainable future, a visual narrative that makes it easier to understand the country’s progress in research and innovation.

The organisations supporting the event include, in addition to the principal organiser Istituto Italiano di Tecnologia (Italian Institute of Technology), the international Convergent Science Network [emphasis mine], the Office of Naval Research, Radboud University Nijmegen, and the Living, Adaptive and Energy-autonomous Materials Systems Cluster of Excellence in Freiburg.

Event website: https://livingmachinesconference.eu/2023/

I was particularly struck by this quote, “The conference is rooted in the union between robotics and neuroscience [emphasis mine], using man and other animal species as a model for the study of intelligence and control systems,” from Barbara Mazzolai as I have an as yet unpublished post for a UNESCO neurotechnology event coming up on July 13, 2023. These events come on the heels of a May 16, 2023 Canadian Science Policy Centre panel discussion on responsible neurotechnology (see my May 12, 2023 posting).

For the curious, you can find the Convergent Science Network here.

Baby steps toward a quantum brain

My first quantum brain posting! (Well, I do have something that seems loosely related in a July 5, 2017 posting about quantum entanglement and machine learning and more. Also, I have lots of item on brainlike or neuromorphic computing.)

Getting to the latest news, a February 1, 2021 news item on Nanowerk announces research in to new intelligent materials that could lead to a ‘quantum brain’,

An intelligent material that learns by physically changing itself, similar to how the human brain works, could be the foundation of a completely new generation of computers. Radboud [university in the Netherlands] physicists working toward this so-called “quantum brain” have made an important step. They have demonstrated that they can pattern and interconnect a network of single atoms, and mimic the autonomous behaviour of neurons and synapses in a brain.

If I understand the difference between the work in 2017 and this latest work, it’s that in 2017 they were looking at quantum states and their possible effect on machine learning, while this work in 2021 is focused on a new material with some special characteristics.

A February 1, 2021 Radboud University press release (also on EurekAlert), which originated the news item, provides information on the case supporting the need for a quantum brain and some technical details about how it might be achieved,

Considering the growing global demand for computing capacity, more and more data centres are necessary, all of which leave an ever-expanding energy footprint. ‘It is clear that we have to find new strategies to store and process information in an energy efficient way’, says project leader Alexander Khajetoorians, Professor of Scanning Probe Microscopy at Radboud University.

‘This requires not only improvements to technology, but also fundamental research in game changing approaches. Our new idea of building a ‘quantum brain’ based on the quantum properties of materials could be the basis for a future solution for applications in artificial intelligence.’

Quantum brain

For artificial intelligence to work, a computer needs to be able to recognise patterns in the world and learn new ones. Today’s computers do this via machine learning software that controls the storage and processing of information on a separate computer hard drive. ‘Until now, this technology, which is based on a century-old paradigm, worked sufficiently. However, in the end, it is a very energy-inefficient process’, says co-author Bert Kappen, Professor of Neural networks and machine intelligence.

The physicists at Radboud University researched whether a piece of hardware could do the same, without the need of software. They discovered that by constructing a network of cobalt atoms on black phosphorus they were able to build a material that stores and processes information in similar ways to the brain, and, even more surprisingly, adapts itself.

Self-adapting atoms

In 2018, Khajetoorians and collaborators showed that it is possible to store information in the state of a single cobalt atom. By applying a voltage to the atom, they could induce “firing”, where the atom shuttles between a value of 0 and 1 randomly, much like one neuron. They have now discovered a way to create tailored ensembles of these atoms, and found that the firing behaviour of these ensembles mimics the behaviour of a brain-like model used in artificial intelligence.

In addition to observing the behaviour of spiking neurons, they were able to create the smallest synapse known to date. Unknowingly, they observed that these ensembles had an inherent adaptive property: their synapses changed their behaviour depending on what input they “saw”. ‘When stimulating the material over a longer period of time with a certain voltage, we were very surprised to see that the synapses actually changed. The material adapted its reaction based on the external stimuli that it received. It learned by itself’, says Khajetoorians.

Exploring and developing the quantum brain

The researchers now plan to scale up the system and build a larger network of atoms, as well as dive into new “quantum” materials that can be used. Also, they need to understand why the atom network behaves as it does. ‘We are at a state where we can start to relate fundamental physics to concepts in biology, like memory and learning’, says Khajetoorians.

If we could eventually construct a real machine from this material, we would be able to build self-learning computing devices that are more energy efficient and smaller than today’s computers. Yet, only when we understand how it works – and that is still a mystery – will we be able to tune its behaviour and start developing it into a technology. It is a very exciting time.’

Here is a charming image illustrating the reasons for a quantum brain,

Courtesy: Radboud University

Here’s a link to and a citation for the paper,

An atomic Boltzmann machine capable of self-adaption by Brian Kiraly, Elze J. Knol, Werner M. J. van Weerdenburg, Hilbert J. Kappen & Alexander A. Khajetoorians. Nature Nanotechnology (2021) DOI: https://doi.org/10.1038/s41565-020-00838-4 Published: 01 February 2021

This paper is behind a paywall.