Tag Archives: self-assembling

Growing metallic snowflakes at the nanoscale

Caption: Nano-scale snowflake from Gallium solvent. Credit: Waipapa Taumata Rau, University of Auckland

’tis the season for snowflakes here in the Northern Hemisphere. Oddly, these metallic snowflakes (they look more like plant leaves to me) come from the Southern Hemisphere (New Zealand and Australia to be precise). From a December 10, 2022 news item on Nanowerk, which includes a brief definition of nanotechnology written in an approachable style,

Scientists in New Zealand and Australia working at the level of atoms created something unexpected: tiny metallic snowflakes.

Why’s that significant? Because coaxing individual atoms to cooperate is leading to a revolution in engineering and technology via nanomaterials. (And creating snowflakes is cool.)

Nanoscale structures (a nanometre is one billionth of a metre) can aid electronic manufacturing, make materials stronger yet lighter, or aid environmental clean-ups by binding to toxins.

A December 9, 2022 University of Auckland press release (also on EurekAlert but published on December 8, 2022), which originated the news item, delves into the research,

To create metallic nanocrystals, New Zealand and Australian scientists have been experimenting with gallium, a soft, silvery metal which is used in semiconductors and, unusually, liquifies at just above room temperature. Their results were just reported in the journal Science.



The Australian team worked in the lab with nickel, copper, zinc, tin, platinum, bismuth, silver and aluminium, growing metal crystals in a liquid solvent of gallium. Metals were dissolved in gallium at high temperatures. Once cooled, the metallic crystals emerged while the gallium remained liquid. The New Zealand team, part of the MacDiarmid Institute for Advanced Materials and Nanotechnology, a national Centre of Research Excellence, carried out simulations of molecular dynamics to explain why differently shaped crystals emerge from different metals. (The government’s Marsden Fund supported the research.)

“What we are learning is that the structure of the liquid gallium is very important,” says Gaston. “That’s novel because we usually think of liquids as lacking structure or being only randomly structured.” Interactions between the atomistic structures of the different metals and the liquid gallium cause differently shaped crystals to emerge, the scientists showed.

The crystals included cubes, rods, hexagonal plates and the zinc snowflake shapes. The six-branched symmetry of zinc, with each atom surrounded by six neighbours at equivalent distances, accounts for the snowflake design. “In contrast to top-down approaches to forming nanostructure – by cutting away material – this bottom-up approaches relies on atoms self-assembling,” says Gaston. “This is how nature makes nanoparticles, and is both less wasteful and much more precise than top-down methods.” She says the research has opened up a new, unexplored pathway for metallic nanostructures. “There’s also something very cool in creating a metallic snowflake!”

Here’s a link to and a citation for the paper,

Liquid metal synthesis solvents for metallic crystals by Shuhada A. Idrus-Saidi, Jianbo Tang, Stephanie Lambie, Jialuo Han, Mohannad Mayyas, Mohammad B. Ghasemian, Francois-Marie Allioux, Shengxiang Cai, Pramod Koshy, Peyman Mostaghimi, Krista G. Steenbergen, Amanda S. Barnard, Torben Daeneke, Nicola Gaston, and Kourosh Kalantar-Zadeh. Science 8 Dec 2022 Vol 378, Issue 6624 pp. 1118-1124 DOI: 10.1126/science.abm2731

This paper is behind a paywall.

The mystifying physics of paint-on semiconductors

I was not expecting a Canadian connection but it seems we are heavily invested in this research at the Georgia Institute of Technology (Georgia Tech), from a March 19, 2018 news item on ScienceDaily,

Some novel materials that sound too good to be true turn out to be true and good. An emergent class of semiconductors, which could affordably light up our future with nuanced colors emanating from lasers, lamps, and even window glass, could be the latest example.

These materials are very radiant, easy to process from solution, and energy-efficient. The nagging question of whether hybrid organic-inorganic perovskites (HOIPs) could really work just received a very affirmative answer in a new international study led by physical chemists at the Georgia Institute of Technology.

A March 19,. 2018 Georgia Tech news release (also on EurekAlert), which originated the news item, provides more detail,

The researchers observed in an HOIP a “richness” of semiconducting physics created by what could be described as electrons dancing on chemical underpinnings that wobble like a funhouse floor in an earthquake. That bucks conventional wisdom because established semiconductors rely upon rigidly stable chemical foundations, that is to say, quieter molecular frameworks, to produce the desired quantum properties.

“We don’t know yet how it works to have these stable quantum properties in this intense molecular motion,” said first author Felix Thouin, a graduate research assistant at Georgia Tech. “It defies physics models we have to try to explain it. It’s like we need some new physics.”

Quantum properties surprise

Their gyrating jumbles have made HOIPs challenging to examine, but the team of researchers from a total of five research institutes in four countries succeeded in measuring a prototypical HOIP and found its quantum properties on par with those of established, molecularly rigid semiconductors, many of which are graphene-based.

“The properties were at least as good as in those materials and may be even better,” said Carlos Silva, a professor in Georgia Tech’s School of Chemistry and Biochemistry. Not all semiconductors also absorb and emit light well, but HOIPs do, making them optoelectronic and thus potentially useful in lasers, LEDs, other lighting applications, and also in photovoltaics.

The lack of molecular-level rigidity in HOIPs also plays into them being more flexibly produced and applied.

Silva co-led the study with physicist Ajay Ram Srimath Kandada. Their team published the results of their study on two-dimensional HOIPs on March 8, 2018, in the journal Physical Review Materials. Their research was funded by EU Horizon 2020, the Natural Sciences and Engineering Research Council of Canada, the Fond Québécois pour la Recherche, the [National] Research Council of Canada, and the National Research Foundation of Singapore. [emphases mine]

The ‘solution solution’

Commonly, semiconducting properties arise from static crystalline lattices of neatly interconnected atoms. In silicon, for example, which is used in most commercial solar cells, they are interconnected silicon atoms. The same principle applies to graphene-like semiconductors.

“These lattices are structurally not very complex,” Silva said. “They’re only one atom thin, and they have strict two-dimensional properties, so they’re much more rigid.”

“You forcefully limit these systems to two dimensions,” said Srimath Kandada, who is a Marie Curie International Fellow at Georgia Tech and the Italian Institute of Technology. “The atoms are arranged in infinitely expansive, flat sheets, and then these very interesting and desirable optoelectronic properties emerge.”

These proven materials impress. So, why pursue HOIPs, except to explore their baffling physics? Because they may be more practical in important ways.

“One of the compelling advantages is that they’re all made using low-temperature processing from solutions,” Silva said. “It takes much less energy to make them.”

By contrast, graphene-based materials are produced at high temperatures in small amounts that can be tedious to work with. “With this stuff (HOIPs), you can make big batches in solution and coat a whole window with it if you want to,” Silva said.

Funhouse in an earthquake

For all an HOIP’s wobbling, it’s also a very ordered lattice with its own kind of rigidity, though less limiting than in the customary two-dimensional materials.

“It’s not just a single layer,” Srimath Kandada said. “There is a very specific perovskite-like geometry.” Perovskite refers to the shape of an HOIPs crystal lattice, which is a layered scaffolding.

“The lattice self-assembles,” Srimath Kandada said, “and it does so in a three-dimensional stack made of layers of two-dimensional sheets. But HOIPs still preserve those desirable 2D quantum properties.”

Those sheets are held together by interspersed layers of another molecular structure that is a bit like a sheet of rubber bands. That makes the scaffolding wiggle like a funhouse floor.

“At room temperature, the molecules wiggle all over the place. That disrupts the lattice, which is where the electrons live. It’s really intense,” Silva said. “But surprisingly, the quantum properties are still really stable.”

Having quantum properties work at room temperature without requiring ultra-cooling is important for practical use as a semiconductor.

Going back to what HOIP stands for — hybrid organic-inorganic perovskites – this is how the experimental material fit into the HOIP chemical class: It was a hybrid of inorganic layers of a lead iodide (the rigid part) separated by organic layers (the rubber band-like parts) of phenylethylammonium (chemical formula (PEA)2PbI4).

The lead in this prototypical material could be swapped out for a metal safer for humans to handle before the development of an applicable material.

Electron choreography

HOIPs are great semiconductors because their electrons do an acrobatic square dance.

Usually, electrons live in an orbit around the nucleus of an atom or are shared by atoms in a chemical bond. But HOIP chemical lattices, like all semiconductors, are configured to share electrons more broadly.

Energy levels in a system can free the electrons to run around and participate in things like the flow of electricity and heat. The orbits, which are then empty, are called electron holes, and they want the electrons back.

“The hole is thought of as a positive charge, and of course, the electron has a negative charge,” Silva said. “So, hole and electron attract each other.”

The electrons and holes race around each other like dance partners pairing up to what physicists call an “exciton.” Excitons act and look a lot like particles themselves, though they’re not really particles.

Hopping biexciton light

In semiconductors, millions of excitons are correlated, or choreographed, with each other, which makes for desirable properties, when an energy source like electricity or laser light is applied. Additionally, excitons can pair up to form biexcitons, boosting the semiconductor’s energetic properties.

“In this material, we found that the biexciton binding energies were high,” Silva said. “That’s why we want to put this into lasers because the energy you input ends up to 80 or 90 percent as biexcitons.”

Biexcitons bump up energetically to absorb input energy. Then they contract energetically and pump out light. That would work not only in lasers but also in LEDs or other surfaces using the optoelectronic material.

“You can adjust the chemistry (of HOIPs) to control the width between biexciton states, and that controls the wavelength of the light given off,” Silva said. “And the adjustment can be very fine to give you any wavelength of light.”

That translates into any color of light the heart desires.

###

Coauthors of this paper were Stefanie Neutzner and Annamaria Petrozza from the Italian Institute of Technology (IIT); Daniele Cortecchia from IIT and Nanyang Technological University (NTU), Singapore; Cesare Soci from the Centre for Disruptive Photonic Technologies, Singapore; Teddy Salim and Yeng Ming Lam from NTU; and Vlad Dragomir and Richard Leonelli from the University of Montreal. …

Three Canadian science funding agencies plus European and Singaporean science funding agencies but not one from the US ? That’s a bit unusual for research undertaken at a US educational institution.

In any event, here’s a link to and a citation for the paper,

Stable biexcitons in two-dimensional metal-halide perovskites with strong dynamic lattice disorder by Félix Thouin, Stefanie Neutzner, Daniele Cortecchia, Vlad Alexandru Dragomir, Cesare Soci, Teddy Salim, Yeng Ming Lam, Richard Leonelli, Annamaria Petrozza, Ajay Ram Srimath Kandada, and Carlos Silva. Phys. Rev. Materials 2, 034001 – Published 8 March 2018

This paper is behind a paywall.

Teslaphoresis; self-assembling materials from a distance

Getting carbon nanotubes to self-assemble from a distance is possible according to an April 14, 2016 news item on ScienceDaily,

Scientists at Rice University have discovered that the strong force field emitted by a Tesla coil causes carbon nanotubes to self-assemble into long wires, a phenomenon they call “Teslaphoresis.”

An April 14, 2016 Rice University (US) news release, (also on EurekAlert) which originated the news item, expands on the theme,

Cherukuri [Rice chemist Paul Cherukuri] sees this research as setting a clear path toward scalable assembly of nanotubes from the bottom up.

The system works by remotely oscillating positive and negative charges in each nanotube, causing them to chain together into long wires. Cherukuri’s specially designed Tesla coil even generates a tractor beam-like effect as nanotube wires are pulled toward the coil over long distances.

This force-field effect on matter had never been observed on such a large scale, Cherukuri said, and the phenomenon was unknown to Nikola Tesla, who invented the coil in 1891 with the intention of delivering wireless electrical energy.

“Electric fields have been used to move small objects, but only over ultrashort distances,” Cherukuri said. “With Teslaphoresis, we have the ability to massively scale up force fields to move matter remotely.”

The researchers discovered that the phenomenon simultaneously assembles and powers circuits that harvest energy from the field. In one experiment, nanotubes assembled themselves into wires, formed a circuit connecting two LEDs and then absorbed energy from the Tesla coil’s field to light them.

Cherukuri realized a redesigned Tesla coil could create a powerful force field at distances far greater than anyone imagined. His team observed alignment and movement of the nanotubes several feet away from the coil. “It is such a stunning thing to watch these nanotubes come alive and stitch themselves into wires on the other side of the room,” he said.

Nanotubes were a natural first test material, given their heritage at Rice, where the HiPco production process was invented. But the researchers envision many other nanomaterials can be assembled as well.

Lindsey Bornhoeft, the paper’s lead author and a biomedical engineering graduate student at Texas A&M University, said the directed force field from the bench-top coil at Rice is restricted to just a few feet. To examine the effects on matter at greater distances would require larger systems that are under development. Cherukuri suggested patterned surfaces and multiple Tesla coil systems could create more complex self-assembling circuits from nanoscale-sized particles.

Cherukuri and his wife, Tonya, also a Rice alum and a co-author of the paper, noted that their son Adam made some remarkable observations while watching videos of the experiment. “I was surprised that he noticed patterns in nanotube movements that I didn’t see,” Cherukuri said. “I couldn’t make him an author on the paper, but both he and his little brother John are acknowledged for helpful discussions.”

Cherukuri knows the value of youthful observation — and imagination — since he started designing Tesla coils as a teen. “I would have never thought, as a 14-year-old kid building coils, that it was going to be useful someday,” he said.

Cherukuri and his team self-funded the work, which he said made it more meaningful for the group. “This was one of the most exciting projects I’ve ever done, made even more so because it was an all-volunteer group of passionate scientists and students. But because Rice has this wonderful culture of unconventional wisdom, we were able to make an amazing discovery that pushes the frontiers of nanoscience.”

The teammates look forward to seeing where their research leads. “These nanotube wires grow and act like nerves, and controlled assembly of nanomaterials from the bottom up may be used as a template for applications in regenerative medicine,” Bornhoeft said.

“There are so many applications where one could utilize strong force fields to control the behavior of matter in both biological and artificial systems,” Cherukuri said. “And even more exciting is how much fundamental physics and chemistry we are discovering as we move along. This really is just the first act in an amazing story.”

Rice University has produced a video featuring the research and the researchers,

Here’s a link to and a citation for the paper,

Teslaphoresis of Carbon Nanotubes by Lindsey R. Bornhoeft, Aida C. Castillo, Preston R. Smalley, Carter Kittrell, Dustin K. James, Bruce E. Brinson, Thomas R. Rybolt, Bruce R. Johnson, Tonya K. Cherukuri†, and Paul Cherukuri. ACS Nano, Article ASAP DOI: 10.1021/acsnano.6b02313 Publication Date (Web): April 13, 2016

Copyright © 2016 American Chemical Society

This paper is behind a paywall.

The Tesla coil was created by Nikola Tesla, a renowned Serbian-American scientist and engineer.

Nanoscale snowman and Season’s Greetings

It’s being described as a ‘jeweled nano-snowman’ but platinum and titanium aren’t my idea of jewels. Still, it’s a cheerful, seasonal greeting.

Courtesy of the University of Birmingham Nanoscale Physics Research Laboratory

Courtesy of the University of Birmingham Nanoscale Physics Research Laboratory

A December 22, 2015 news item on Nanowerk tells more of the story,

Would a jewel-encrusted snowman make the perfect Christmas present? At only 5 nanometres in size, the price might be lower than you think. And it’s functional too, catalysing the splitting of water to make green hydrogen for fuel cells.

A December 22, 2015 University of Birmingham Nanoscale Physics Research Laboratory (NPRL) press release, which originated the news item, provides more detail,

The nanoparticle, as imaged with an aberration-corrected scanning transmission electron microscope, features eyes, nose and mouth of precious-metal platinum clusters embedded in a titanium dioxide face. Each platinum cluster typically contains 30 platinum atoms; within the whole nanoparticle there are approximately 1,680 titanium atoms and 180 platinum atoms. The nano-snowman formed spontaneously from a self-assembled platinum-titanium nanoparticle which was oxidised in air, drawing the titanium atoms out to the surface. The self-assembly occurred in a gas phase, cluster beam condensation source, before size-selection with a mass spectrometer and deposition onto a carbon surface for oxidation and then imaging. The mass of the snowman is 120,000 atomic mass units. Compared with a more conventional pure platinum catalyst particle, the inclusion of the titanium atoms offers two potential benefits: dilution of how much precious platinum is needed to perform the catalysis, and protection of the platinum cores against sintering (i.e. aggregation of the nanoparticles). The shell is porous enough to allow hydrogen through and the particles are functional in the hydrogen evolution reaction. The research was performed at the Nanoscale Physics Research Lab by Caroline Blackmore and Ross Griffin. …

The scientists did a little bit of work adding colour (most of these images are gray on gray), as well as, the holly and berry frame.

Joyeux Noël et Bonne Année or Season’s Greetings!

Self-assembling copper and physiology

An Aug. 24, 2015 news item on Nanowerk highlights work at Louisiana Tech University (US) on self-assembling copper nanocomposites in liquid form,

Faculty at Louisiana Tech University have discovered, for the first time, a new nanocomposite formed by the self-assembly of copper and a biological component that occurs under physiological conditions, which are similar those found in the human body and could be used in targeted drug delivery for fighting diseases such as cancer.

The team, led by Dr. Mark DeCoster, the James E. Wyche III Endowed Associate Professor in Biomedical Engineering at Louisiana Tech, has also discovered a way for this synthesis to be carried out in liquid form. This would allow for controlling the scale of the synthesis up or down, and to grow structures with larger features, so they can be observed.

An Aug. 24, 2015 Louisiana Tech University news release by Dave Guerin, which originated the news item, describes possible future  applications and the lead researcher’s startup company,

“We are currently investigating how this new material interacts with cells,” said DeCoster. “It may be used, for example for drug delivery, which could be used in theory for fighting diseases such as cancer. Also, as a result of the copper component that we used, there could be some interesting electronics, energy, or optics applications that could impact consumer products. In addition, copper has some interesting and useful antimicrobial features.

“Finally, as the recent environmental spill of mining waste into river systems showed us, metals, including copper, can sometimes make their way into freshwater systems, so our newly discovered metal-composite methods could provide a way to “bind up” unwanted copper into a useful or more stable form.”

DeCoster said there were two aspects of this discovery that surprised him and his research team. First, they found that once formed, these copper nanocomposites were incredibly stable both in liquid or dried form, and remained stable for years. “We have been carrying out this research for at least four years and have a number of samples that are at least two years old and still stable,” DeCoster said.

Second, DeCoster’s group was very surprised that these composites are resistant to agglomeration, which is the process by which material clumps or sticks together.

“This is of benefit because it allows us to work with individual structures in order to separate or modify them chemically,” explains DeCoster. “When materials stick together and clump, as many do, it is much harder to work with them in a logical way. Both of these aspects, however, fit with our hypothesis that the self-assembly that we have discovered is putting positively charged copper together with negatively charged sulfur-containing cystine.”

The research discovery was a team effort that included DeCoster and Louisiana Tech students at the bachelor, master and doctoral level. “The quality of my team in putting together a sustained effort to figure out what was needed to reproducibly carry out the new self-assembly methods and to simplify them really speaks well as to what can be accomplished at Louisiana Tech University,” DeCoster said. “Furthermore, the work is very multi-disciplinary, meaning that it required nanotechnology as well as biological and biochemical insights to make it all work, as well as some essential core instrumentation that we have at Louisiana Tech.”

DeCoster says the future of this research has some potentially high impacts. He and his team are speaking with colleagues and collaborators about how to test these new nanocomposites for applications in bioengineering and larger composites such as materials that would be large enough to be hand-held.

“Our recent publication of the work could generate some interest and new ideas,” said DeCoster. “We are working on new proposals to fund the research and to keep it moving forward. We are currently making these materials on an ‘as needed’ basis, knowing that they can be stored once generated, and if we discover new uses for the nanocomposites, then applications for the materials could lead to income generation through a start-up company that I have formed.”

Here’s a link to and a citation for the paper,

MediumGeneration of Scalable, Metallic High-Aspect Ratio Nanocomposites in a Biological Liquid Medium by Kinsey Cotton Kelly, Jessica R. Wasserman, Sneha Deodhar, Justin Huckaby, and Mark A. DeCoster. J. Vis. Exp. [Journal of Visual Experimentation; JoVE] (101), e52901, doi:10.3791/52901 (2015).

This paper/video is behind a paywall.

There’s more than one black gold

‘Black gold’ is a phrase I associate with oil, signifying its importance and desirability. These days, this analogic phrase can describe a material according to a July 24, 2015 news item on Nanowerk,

If colloidal gold [gold in solution] self-assembles into the form of larger vesicles, a three-dimensional state can be achieved that is called “black gold” because it absorbs almost the entire spectrum of visible light. How this novel intense plasmonic state can be established and what its characteristics and potential medical applications are is explored by Chinese scientists and reported in the journal Angewandte Chemie …

A July 24, 2015 Wiley (Angewandte Chemie) press release, which originated the news item, provides more details,

Metal nanostructures can self-assemble into superstructures that offer intriguing new spectroscopic and mechanical properties. Plasmonic coupling plays a particular role in this context. For example, it has been found that plasmonic metal nanoparticles help to scatter the incoming light across the surface of the Si substrate at resonance wavelengths, therefore enhancing the light absorbing potential and thus the effectivity of solar cells.

On the other hand, plasmonic vesicles are the promising theranostic platform for biomedical applications, a notion which inspired Yue Li and Cuncheng Li of the Chinese Academy of Science, Hefei, China, and the University of Jinan, China, as well as collaborators to prepare plasmonic colloidosomes composed of gold nanospheres.

As the method of choice, the scientists have designed an emulsion-templating approach based on monodispersed gold nanospheres as building blocks, which arranged themselves into large spherical vesicles in a reverse emulsion system.

The resulting plasmonic vesicles were of micrometer-size and had a shell composed of hexagonally close-packed colloidal nanosphere particles in bilayer or, for the very large superspheres, multilayer arrangement, which provided the enhanced stability.

“A key advantage of this system is that such self-assembly can avoid the introduction of complex stabilization processes to lock the nanoparticles together”, the authors explain.

The hollow spheres exhibited an intense plasmonic resonance in their three-dimensionally packed structure and had a dark black appearance compared to the brick red color of the original gold nanoparticles. The “black gold” was thus characterized by a strong broadband absorption in the visible light and a very regular vesicle superstructure. In medicine, gold vesicles are intensively discussed as vehicles for the drug delivery to tumor cells, and, therefore, it could be envisaged to exploit the specific light-matter interaction of such plasmonic vesicle structures for medical use, but many other applications are also feasible, as the authors propose: “The presented strategy will pave a way to achieve noble-metal superstructures for biosensors, drug delivery, photothermal therapy, optical microcavity, and microreaction platforms.” This will prove the flexibility and versatility of the noble-metal nanostructures.

Here’s a link to and a citation for the paper,

Black Gold: Plasmonic Colloidosomes with Broadband Absorption Self-Assembled from Monodispersed Gold Nanospheres by Using a Reverse Emulsion System by Dilong Liu, Dr. Fei Zhou, Cuncheng Li, Tao Zhang, Honghua Zhang, Prof. Weiping Cai, and Prof. Yue Li. Angewandte Chemie International Edition Article first published online: 25 JUN 2015 DOI: 10.1002/anie.201503384

© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim

This article is behind a paywall.

There is an image illustrating the work but, sadly, the gold doesn’t look black,

BlackGold

© Wiley-VCH

That’s it!

Self-assembling nanofibres could help mitigate side effects from pain killers

The research itself is pretty exciting but even more so is the fact that it was conducted by an undergraduate student. From an April 3, 2015 news item on Azonano,

A Chemistry undergraduate at the University of York [UK] has helped to develop a new drug release gel, which may help avoid some of the side effects of painkillers such as ibuprofen and naproxen.

In a final year project, MChem undergraduate student Edward Howe, working in Professor David Smith’s research team in the Department of Chemistry at York looked for a way of eliminating the adverse side-effects associated pain-killing drugs, particularly in the stomach, and the problems, such as ulceration, this could cause patients.

A March 31, 2015 University of York press release, which originated the news item, describes the research in more detail,

Supervised by PhD student Babatunde Okesola, whose research is supported by The Wild Chemistry Scholars Fund, Edward hoped to create gels which could interact with drugs such as Naproxen, and release them at the slightly alkaline pH values found in the intestine rather than the acidic conditions in the stomach.  His aim was to both protect the pain-killing drugs and help limit some of the side effects they can cause.

The researchers created a new gel, based on small molecules which self-assemble into nanofibers which could interact with a variety of anti-inflammatory, painkiller drugs, including iburofen and naproxen. The research is published in Chemical Communications.

Specific interactions between the gel nanofibres and the drugs meant that high loadings could be achieved, and more importantly, the release of the drug could be precisely controlled.  The gels were able to release naproxen at pH 8 – the value found in the intestine, but not at lower pH values found elsewhere in the body.

Professor Smith said: “Although researchers have used gels before to try and improve the formulation of naproxen, this is the first time that a self-assembling system has been used for the job, with the advantages of directed interactions between the nanoscale delivery scaffold and the drug.  As such, this is the first time that such precise control has been achieved.”

Edward Howe said: “The research really fascinated me. The prospect of being involved in developing a method to reduce the pain of others filled me with great pride. Understanding the interactions between the gel and the painkillers was very interesting and improved my knowledge of supramolecular chemistry.”

The next step for Professor Smith’s team will involve stabilising the gel drug delivery systems in the very acidic, low pH conditions found in the stomach so that they can transit safely to the intestine before delivering naproxen just where it is needed.

Professor Smith added: “Perhaps this is something that one of next year’s undergraduate project students might solve. As a research-intensive institution, York is committed to its undergraduates carrying out cutting-edge research such as this.”

Here’s a link to and a citation for the paper,

Self-assembled sorbitol-derived supramolecular hydrogels for the controlled encapsulation and release of active pharmaceutical ingredients by Edward J. Howe, Babatunde O. Okesola, and David K. Smith. Chem. Commun., 2015, Advance Article DOI: 10.1039/C5CC01868D First published online 31 Mar 2015

This paper is behind a paywall.

Self-organizing nanotubes and nonequilibrium systems provide insights into evolution and artificial life

If you’re interested in the second law of thermodynamics, this Feb. 10, 2015 news item on ScienceDaily provides some insight into the second law, self-organized systems, and evolution,

The second law of thermodynamics tells us that all systems evolve toward a state of maximum entropy, wherein all energy is dissipated as heat, and no available energy remains to do work. Since the mid-20th century, research has pointed to an extension of the second law for nonequilibrium systems: the Maximum Entropy Production Principle (MEPP) states that a system away from equilibrium evolves in such a way as to maximize entropy production, given present constraints.

Now, physicists Alexey Bezryadin, Alfred Hubler, and Andrey Belkin from the University of Illinois at Urbana-Champaign, have demonstrated the emergence of self-organized structures that drive the evolution of a non-equilibrium system to a state of maximum entropy production. The authors suggest MEPP underlies the evolution of the artificial system’s self-organization, in the same way that it underlies the evolution of ordered systems (biological life) on Earth. …

A Feb. 10, 2015 University of Illinois College of Engineering news release (also on EurekAlert), which originated the news item, provides more detail about the theory and the research,

MEPP may have profound implications for our understanding of the evolution of biological life on Earth and of the underlying rules that govern the behavior and evolution of all nonequilibrium systems. Life emerged on Earth from the strongly nonequilibrium energy distribution created by the Sun’s hot photons striking a cooler planet. Plants evolved to capture high energy photons and produce heat, generating entropy. Then animals evolved to eat plants increasing the dissipation of heat energy and maximizing entropy production.

In their experiment, the researchers suspended a large number of carbon nanotubes in a non-conducting non-polar fluid and drove the system out of equilibrium by applying a strong electric field. Once electrically charged, the system evolved toward maximum entropy through two distinct intermediate states, with the spontaneous emergence of self-assembled conducting nanotube chains.

In the first state, the “avalanche” regime, the conductive chains aligned themselves according to the polarity of the applied voltage, allowing the system to carry current and thus to dissipate heat and produce entropy. The chains appeared to sprout appendages as nanotubes aligned themselves so as to adjoin adjacent parallel chains, effectively increasing entropy production. But frequently, this self-organization was destroyed through avalanches triggered by the heating and charging that emanates from the emerging electric current streams. (…)

“The avalanches were apparent in the changes of the electric current over time,” said Bezryadin.

“Toward the final stages of this regime, the appendages were not destroyed during the avalanches, but rather retracted until the avalanche ended, then reformed their connection. So it was obvious that the avalanches correspond to the ‘feeding cycle’ of the ‘nanotube inset’,” comments Bezryadin.

In the second relatively stable stage of evolution, the entropy production rate reached maximum or near maximum. This state is quasi-stable in that there were no destructive avalanches.

The study points to a possible classification scheme for evolutionary stages and a criterium for the point at which evolution of the system is irreversible—wherein entropy production in the self-organizing subsystem reaches its maximum possible value. Further experimentation on a larger scale is necessary to affirm these underlying principals, but if they hold true, they will prove a great advantage in predicting behavioral and evolutionary trends in nonequilibrium systems.

The authors draw an analogy between the evolution of intelligent life forms on Earth and the emergence of the wiggling bugs in their experiment. The researchers note that further quantitative studies are needed to round out this comparison. In particular, they would need to demonstrate that their “wiggling bugs” can multiply, which would require the experiment be reproduced on a significantly larger scale.

Such a study, if successful, would have implications for the eventual development of technologies that feature self-organized artificial intelligence, an idea explored elsewhere by co-author Alfred Hubler, funded by the Defense Advanced Research Projects Agency [DARPA]. [emphasis mine]

“The general trend of the evolution of biological systems seems to be this: more advanced life forms tend to dissipate more energy by broadening their access to various forms of stored energy,” Bezryadin proposes. “Thus a common underlying principle can be suggested between our self-organized clouds of nanotubes, which generate more and more heat by reducing their electrical resistance and thus allow more current to flow, and the biological systems which look for new means to find food, either through biological adaptation or by inventing more technologies.

“Extended sources of food allow biological forms to further grow, multiply, consume more food and thus produce more heat and generate entropy. It seems reasonable to say that real life organisms are still far from the absolute maximum of the entropy production rate. In both cases, there are ‘avalanches’ or ‘extinction events’, which set back this evolution. Only if all free energy given by the Sun is consumed, by building a Dyson sphere for example, and converted into heat then a definitely stable phase of the evolution can be expected.”

“Intelligence, as far as we know, is inseparable from life,” he adds. “Thus, to achieve artificial life or artificial intelligence, our recommendation would be to study systems which are far from equilibrium, with many degrees of freedom—many building blocks—so that they can self-organize and participate in some evolution. The entropy production criterium appears to be the guiding principle of the evolution efficiency.”

I am fascinated

  • (a) because this piece took an unexpected turn onto the topic of artificial life/artificial intelligence,
  • (b) because of my longstanding interest in artificial life/artificial intelligence,
  • (c) because of the military connection, and
  • (d) because this is the first time I’ve come across something that provides a bridge from fundamental particles to nanoparticles.

Here’s a link to and a citation for the paper,

Self-Assembled Wiggling Nano-Structures and the Principle of Maximum Entropy Production by A. Belkin, A. Hubler, & A. Bezryadin. Scientific Reports 5, Article number: 8323 doi:10.1038/srep08323 Published 09 February 2015

Adding to my delight, this paper is open access.

Watching buckyballs (buckminsterfullerenes) self-assemble in real-time

For the 5% or less of the world who need this explanation, the reference to a football later in this post is, in fact, a reference to a soccer ball. Moving on to a Nov. 5, 2014 news item on Nanowerk (Note: A link has been removed),

Using DESY’s ultrabright X-ray source PETRA III, researchers have observed in real-time how football-shaped carbon molecules arrange themselves into ultra-smooth layers. Together with theoretical simulations, the investigation reveals the fundamentals of this growth process for the first time in detail, as the team around Sebastian Bommel (DESY and Humboldt Universität zu Berlin) and Nicola Kleppmann (Technische Universität Berlin) reports in the scientific journal Nature Communications (“Unravelling the multilayer growth of the fullerene C60 in real-time”).

This knowledge will eventually enable scientists to tailor nanostructures from these carbon molecules for certain applications, which play an increasing role in the promising field of plastic electronics. The team consisted of scientists from Humboldt-Universität zu Berlin, Technische Universität Berlin, Universität Tübingen and DESY.

Here’s an image of the self-assembling materials,

Caption: This is an artist's impression of the multilayer growth of buckyballs. Credit: Nicola Kleppmann/TU Berlin

Caption: This is an artist’s impression of the multilayer growth of buckyballs.
Credit: Nicola Kleppmann/TU Berlin

A Nov. 5, 2014 DESY (Deutsches Elektronen-Synchrotron) press release (also on EurekAlert), describes the work further,

The scientists studied so called buckyballs. Buckyballs are spherical molecules, which consist of 60 carbon atoms (C60). Because they are reminiscent of American architect Richard Buckminster Fuller’s geodesic domes, they were christened buckminsterfullerenes or “buckyballs” for short. With their structure of alternating pentagons and hexagons, they also resemble tiny molecular footballs. [emphasis mine]

Using DESY’s X-ray source PETRA III, the researchers observed how buckyballs settle on a substrate from a molecular vapour. In fact, one layer after another, the carbon molecules grow predominantly in islands only one molecule high and barely form tower-like structures..“The first layer is 99% complete before 1% of the second layer is formed,” explains DESY researcher Bommel, who is completing his doctorate in Prof. Stefan Kowarik’s group at the Humboldt Universität zu Berlin. This is how extremely smooth layers form.

“To really observe the growth process in real-time, we needed to measure the surfaces on a molecular level faster than a single layer grows, which takes place in about a minute,” says co-author Dr. Stephan Roth, head of the P03 measuring station, where the experiments were carried out. “X-ray investigations are well suited, as they can trace the growth process in detail.”

“In order to understand the evolution of the surface morphology at the molecular level, we carried out extensive simulations in a non-equilibrium system. These describe the entire growth process of C60 molecules into a lattice structure,” explains Kleppmann, PhD student in Prof. Sabine Klapp’s group at the Institute of Theoretical Physics, Technische Universität Berlin. “Our results provide fundamental insights into the molecular growth processes of a system that forms an important link between the world of atoms and that of colloids.”

Through the combination of experimental observations and theoretical simulations, the scientists determined for the first time three major energy parameters simultaneously for such a system: the binding energy between the football molecules, the so-called “diffusion barrier,” which a molecule must overcome if it wants to move on the surface, and the Ehrlich-Schwoebel barrier, which a molecule must overcome if it lands on an island and wants to hop down from that island.

“With these values, we now really understand for the first time how such nanostructures come into existence,” stresses Bommel. “Using this knowledge, it is conceivable that these structures can selectively be grown in the future: How must I change my temperature and deposition rate parameters so that an island of a particular size will grow. This could, for example, be interesting for organic solar cells, which contain C60.” The researchers intend to explore the growth of other molecular systems in the future using the same methods.

Here’s a link to and a citation for the paper,

Unravelling the multilayer growth of the ​fullerene C60 in real time by S. Bommel, N. Kleppmann, C. Weber, H. Spranger, P. Schäfer, J. Novak, S.V. Roth, F. Schreiber, S.H.L. Klapp, & S. Kowarik. Nature Communications 5, Article number: 5388 doi:10.1038/ncomms6388 Published 05 November 2014

This article is open access.

I was not able to find any videos of these buckyballs assembling in real-time. Presumably, there are technical issues with recording the process, financial issues, or some combination thereof. Still, I can’t help but feel teased (tongue in cheek) by these scientists who give me an artist’s concept instead. Hopefully, budgets and/or technology will allow the rest of us to view this process at some time in the future.

Self-assembling and disassembling nanotrain network

A Nov. 11, 2013 University of Oxford news release (also on EurekAlert dated as Nov. 10, 2013) highlights the first item I’ve seen about a nanostructure which both assembles and disassembles itself,

Tiny self-assembling transport networks, powered by nano-scale motors and controlled by DNA, have been developed by scientists at Oxford University and Warwick University.

The system can construct its own network of tracks spanning tens of micrometres in length, transport cargo across the network and even dismantle the tracks.

Researchers were inspired by the melanophore, used by fish cells to control their colour. Tracks in the network all come from a central point, like the spokes of a bicycle wheel. Motor proteins transport pigment around the network, either concentrating it in the centre or spreading it throughout the network. Concentrating pigment in the centre makes the cells lighter, as the surrounding space is left empty and transparent.

The researchers have provided an image,

Nanotrain network created by scientists at Oxford University: green dye-carrying shuttles after 'refuelling' with ATP travel towards the center of the network with their cargoes of green dye. Credit: Adam Wollman/Oxford University

Nanotrain network created by scientists at Oxford University: green dye-carrying shuttles after ‘refuelling’ with ATP travel towards the center of the network with their cargoes of green dye. Credit: Adam Wollman/Oxford University

The news release goes on to describe the system,

The system developed by the Oxford University team is very similar [to the melanophore used by fish cells], and is built from DNA and a motor protein called kinesin. Powered by ATP fuel, kinesins move along the micro-tracks carrying control modules made from short strands of DNA. ‘Assembler’ nanobots are made with two kinesin proteins, allowing them to move tracks around to assemble the network, whereas the ‘shuttles’ only need one kinesin protein to travel along the tracks.

‘DNA is an excellent building block for constructing synthetic molecular systems, as we can program it to do whatever we need,’ said Adam Wollman, who conducted the research at Oxford University’s Department of Physics. ‘We design the chemical structures of the DNA strands to control how they interact with each other. The shuttles can be used to either carry cargo or deliver signals to tell other shuttles what to do.

‘We first use assemblers to arrange the track into ‘spokes’, triggered by the introduction of ATP. We then send in shuttles with fluorescent green cargo which spread out across the track, covering it evenly. When we add more ATP, the shuttles all cluster in the centre of the track where the spokes meet. Next, we send signal shuttles along the tracks to tell the cargo-carrying shuttles to release the fluorescent cargo into the environment, where it disperses. We can also send shuttles programmed with ‘dismantle’ signals to the central hub, telling the tracks to break up.’

This demonstration used fluorescent green dyes as cargo, but the same methods could be applied to other compounds. As well as colour changes, spoke-like track systems could be used to speed up chemical reactions by bringing the necessary compounds together at the central hub. More broadly, using DNA to control motor proteins could enable the development of more sophisticated self-assembling systems for a wide variety of applications.

Here’s a link to and a citation for the paper,

Transport and self-organization across different length scales powered by motor proteins and programmed by DNA by Adam J. M. Wollman, Carlos Sanchez-Cano, Helen M. J. Carstairs, Robert A. Cross, & Andrew J. Turberfield. Nature Nanotechnology (2013) doi:10.1038/nnano.2013.230 Published online 10 November 2013

This article is behind a paywall although you can preview it for free via ReadCube Access.