Tag Archives: Chinese Academy of Sciences (CAS)

Finding graphene flakes on the moon

It seems like there’s graphene on the moon according to an August 1, 2024 news item on phys.org , Note: A link has been removed,

A study, published in National Science Review, reveals the existence of naturally formed few-layer graphene, a substance consisting of carbon atoms in a special, thin-layered structure.

The team, led by professors Meng Zou, Wei Zhang and senior engineer Xiujuan Li from Jilin University and Wencai Ren from the Chinese Academy of Sciences’ Institute of Metal Research, analyzed an olive-shaped sample of lunar soil, about 2.9 millimeters by 1.6 mm, retrieved from the Chang’e 5 mission in 2020.

Caption: (a) Laser scanning confocal microscopy image and height distribution. (b) Backscattered electron SEM image and (c) Raman spectra corresponding to different areas. (d) TEM image, Cs-corrected HAADF-STEM image, and the corresponding EELS Fe L-edge spectra for different areas. (e) Cs-corrected HRTEM images. (f) HAADF-STEM image. (g) EDS elemental maps showing spatial distributions of the elements. (h) HRTEM images of the corresponding regions marked in (f). Credit: ©Science China Press

An August 1, 2024 Science China Press press release on EurekAlert, which originated the news item, provides more details,

According to the team, scientists generally believe that some 1.9 percent of interstellar carbon exists in the form of graphene, with its shape and structure determined by the process of its formation.

Using a special spectrometer, researchers found an iron compound that is closely related to the formation of graphene in a carbon-rich section of the sample. They then used advanced microscopic and mapping technologies to confirm that the carbon content in the sample comprised “flakes” that have two to seven layers of graphene.

The team proposed that the few-layer graphene may have formed in volcanic activity in the early stages of the moon’s existence, and been catalyzed by solar winds that can stir up lunar soil and iron-containing minerals that helped transform the carbon atoms’ structure. They added that impact processes from meteorites, which create high-temperature and high-pressure environments, may also have led to the formation of graphene.

On Earth, graphene is becoming a star in materials sciences due to its special features in optics, electrics and mechanics. The team believes their study could help develop ways to produce the material inexpensively and expand its use.

“The mineral-catalyzed formation of natural graphene sheds light on the development of low-cost scalable synthesis techniques of high-quality graphene,” the paper said. “Therefore, a new lunar exploration program may be promoted, and some forthcoming breakthroughs can be expected.”

Here’s a link to and a citation for the paper,

Discovery of natural few-layer graphene on the Moon by Wei Zhang, Qing Liang, Xiujuan Li, Lai-Peng Ma, Xinyang Li, Zhenzhen Zhao, Rui Zhang, Hongtao Cao, Zizhun Wang, Wenwen Li, Yanni Wang, Meiqi Liu, Nailin Yue, Hongyan Li, Zhenyu Hu, Li Liu, Qiang Zhou, Fangfei Li, Weitao Zheng, Wencai Ren, Meng Zou. National Science Review, nwae211, DOI: https://doi.org/10.1093/nsr/nwae211 Published:: 17 June 2024

This paper is open access and the National Science Review looks like another China-backed journal published by Oxford Academic. If not China-backed, it’s certainly China forward, from the About page,

National Science Review is an open access, peer-reviewed journal aimed at reporting cutting-edge developments across science and technology in China and around the world. The journal covers all areas of the natural sciences, including physics and mathematics, chemistry, life sciences, earth sciences, materials science, and information sciences.

I just realized that I haven’t seen anything recently about which country or countries are the leading the science race. Going by the recent rate of publication, China is doing quite well.

A nonvolatile photo-memristor

Credit: by Xiao Fu, Tangxin Li, Bin Caid, Jinshui Miao, Gennady N. Panin, Xinyu Ma, Jinjin Wang, Xiaoyong Jiang, Qing Lia, Yi Dong, Chunhui Hao, Juyi Sun, Hangyu Xu, Qixiao Zhao, Mengjia Xia, Bo Song, Fansheng Chen, Xiaoshuang Chen, Wei Lu, Weida Hu

it took a while to get there but the February 13, 2023 news item on phys.org announced research into extending memristors from tunable conductance to reconfigurable photo-response,

In traditional vision systems, the optical information is captured by a frame-based digital camera, and then the digital signal is processed afterwards using machine-learning algorithms. In this scenario, a large amount of data (mostly redundant) has to be transferred from a standalone sensing elements to the processing units, which leads to high latency and power consumption.

To address this problem, much effort has been devoted to developing an efficient approach, where some of the memory and computational tasks are offloaded to sensor elements that can perceive and process the optical signal simultaneously.

In a new paper published in Light: Science & Applications, a team of scientists, led by Professor Weida Hu from School of Physics and Optoelectronic Engineering, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China, State Key Laboratory of Infrared Physics, Shanghai Institute of Technical Physics, Chinese Academy of Sciences, Shanghai, China, and co-workers have developed a non-volatile photo-memristor, in which the reconfigurable responsivity can be modulated by the charge and/or photon flux through it and further stored in the device.

A February 13, 2023 Chinese Academy of Sciences press release, which originated the news item, provided more technical detail about the work,

The non-volatile photo-memristor has a simple two-terminal architecture, in which photoexcited carriers and oxygen-related ions are coupled, leading to a displaced and pinched hysteresis in the current-voltage characteristics. For the first time, non-volatile photo-memristors implement computationally complete logic with photoresponse-stateful operations, for which the same photo-memristor serves as both a logic gate and memory, using photoresponse as a physical state variable instead of light, voltage and memresistance. Polarity reversal of photo-memristors shows great potential for in-memory sensing and computing with feature extraction and image recognition for neuromorphic vision.

The photo-memristor demonstrates tunable short-circuit current in a non-volatile mode under illumination. By mimicking the biological functionalities of the human retina and designing specific device structures, the devices can act as neural network for neuromorphic visual processing and implementation of completely photoresponse-stateful logic operations triggered by electrical and light stimuli together. It can support various kinds of sensing tasks with all-in-one sensing-memory-computing approaches. These scientists summarize the operational principle and feature of their device:

“We design[ed] a two-terminal device with MoS2-xOx and specific graphene for three purposes in one: (1) to provide low barrier energy for the migration of oxygen ions; (2) to perform as geometry-asymmetric metal–semiconductor–metal van der Waals heterostructures with multi-photoresponse states; and (3) as an extension of a memristor, this device not only provides tunable conductance, but also demonstrates reconfigurable photoresponse for reading at zero bias voltage.”

“Moreover, the tunable short-circuit photocurrent and photoresponse can be increased to 889.8 nA and 98.8 mA/W, respectively, which are much higher than that of other reconfigurable phototransistors based on 2D materials. To reverse the channel polarity and obtain a gate-tunable short-circuit photocurrent, the channel semiconductor must be thin enough. Thus, it is difficult to use the thick film needed to absorb enough light to get a large signal. In our case, the mechanism of the two-terminal device rearrangement is based on ion migration, which is not limited by the thickness. We can increase the thickness of the film to absorb more photons and get a large short-circuit photocurrent.” they added.

“This new concept of a two-terminal photo-memristor not only enables all-in-one sensing-memory-computing approaches for neuromorphic vision hardware, but also brings great convenience for high-density integration.” the scientists forecast.

Here’s a link to and a citation for the paper,

Graphene/MoS2−xOx/graphene photomemristor with tunable non-volatile responsivities for neuromorphic vision processing by Xiao Fu, Tangxin Li, Bin Caid, Jinshui Miao, Gennady N. Panin, Xinyu Ma, Jinjin Wang, Xiaoyong Jiang, Qing Lia, Yi Dong, Chunhui Hao, Juyi Sun, Hangyu Xu, Qixiao Zhao, Mengjia Xia, Bo Song, Fansheng Chen, Xiaoshuang Chen, Wei Lu, Weida Hu. Light: Science & Applications volume 12, Article number: 39 (2023) DOI: https://doi.org/10.1038/s41377-023-01079-5 Published: 07 February 2023

This paper is open access.

Photonic cellulose nanocrystals (CNC) for flexible sweat sensor

It turns out there’s also a hydrogel aspect to this story about a flexible sweat sensor. As for cellulose nanocrystals (CNC), Canada played a leading role in the development of this nanomaterial and I have a bit more about the Canadian CNC scene later in this posting following the link and citation for the research paper. On to the research,

Highly elastic hydrogels constructed by heat-induced hydrogen bond remodeling can switch between wet and dry states (Image by ZHANG Fusheng and LI Qiongya)

A May 8, 2023 news item on phys.org features this work from the Dalian Institute of Chemical Physics of the Chinese Academy Sciences,

Cellulose nanocrystal (CNC), an emerging bio-based material, has been widely applied in fields such as electronics, bioplastics and energy. However, the functional failure of such materials in wet or liquid environments inevitably impairs their development in biomedicine, membrane separation, environmental monitoring, and wearable devices.

Now, a research group led by Prof. Qing Guangyan from the Dalian Institute of Chemical Physics (DICP) of the Chinese Academy of Sciences [CAS] reported a sustainable, insoluble, and chiral photonic cellulose nanocrystal patch for calcium ion (Ca2+) sensing in sweat.

A May 4, 2023 Dalian Institute of Chemical Physics of the Chinese Academy Sciences press release (also on EurekAlert but published May 8, 2023), which originated the news item, provides more detail about the work,

The researchers developed a simple and efficient method to fabricate insoluble CNC-based hydrogels. They found that by utilizing intermolecular hydrogen bond reconstruction, thermal dehydration enabled the optimized CNC composite photonic film to form a stable hydrogel network in an aqueous solution. Moreover, they indicated that the hydrogel could be reversibly switched between dry and wet states, which was convenient for specific functionalization.

The introduction of functionalized molecules by adsorption swelling in a liquid environment resulted in a hydrogel with freeze resistance (–20°C), strong adhesion, good biocompatibility, and high sensitivity to Ca2+.

“This work is expected to facilitate the application of sustainable cellulose sensors to monitor other metabolites (i.e., glucose, urea, and vitamins, etc.),” said Prof. QING. “It also lays foundation for digitally controlled hydrogel systems operating in environment monitoring, membrane separation, and wearable devices.”

Here’s a link to and a citation for the paper,

Sustainable, Insoluble, and Photonic Cellulose Nanocrystal Patches for Calcium Ion Sensing in Sweat by Qiongya Li, Chenchen He, Cunli Wang, Yuxiao Huang, Jiaqi Yu, Chunbo Wang, Wei Li, Xin Zhang, Fusheng Zhang, Guangyan Qing. small DOI: https://doi.org/10.1002/smll.202207932 First published online: 13 April 2023

This paper is behind a paywall.

FPInnovations is a Canadian research and development (R&D) not-for profit organization that was instrumental in the development of CNC. (If memory serves, they are a spinoff from the University of British Columbia.) There are two Canadian CNC production facilities (that I know of): CelluForce in Québec and Blue Goose Biorefineries in Saskatchewan. I get more information about research into applications for CNC from other parts of the world while the Canadian scene remains mostly silent.

Future firefighters and wearable technology

I imagine this wearable technology would also be useful for the military too. However, the focus for these researchers from China is firefighting. (Given the situation with the Canadian wildfires in June 2023, we have 10x more than the average at this time in the season over the last 10 years, it’s good to see some work focused on safety for firefighters.) From a January 17, 2023 news item on phys.org,

Firefighting may look vastly different in the future thanks to intelligent fire suits and masks developed by multiple research institutions in China.

Researchers published results showing breathable electrodes woven into fabric used in fire suits have proven to be stable at temperatures over 520ºC. At these temperatures, the fabric is found to be essentially non-combustible with high rates of thermal protection time.

Caption: Scientists from multiple institutions address the challenges and limitations of current fire-fighting gear by introducing wearable, breathable sensors and electrodes to better serve firefighters. Credit: Nano Research, Tsinghua University Press

A January 17, 2023 Tsinghua University Press press release on EurekAlert, which originated the news item, provides more technical details,

The results show the efficacy and practicality of Janus graphene/poly(p-phenylene benzobisoxazole), or PBO, woven fabric in making firefighting “smarter” with the main goal being to manufacture products on an industrial scale that are flame-retardant but also intelligent enough to warn the firefighter of increased risks while traversing the flames.

“Conventional firefighting clothing and fire masks can ensure firemen’s safety to a certain extent,” said Wei Fan, professor at the School of Textile Science and Engineering at Xi’an Polytechnic University. “However, the fire scene often changes quickly, sometimes making firefighters trapped in the fire for failing to judge the risks in time. At this situation, firefighters also need to be rescued.”

The key here is the use of Janus graphene/PBO, woven fabrics. While not the first of its kind, the introduction of PBO fibers offers better strength and fire protection than other similar fibers, such as Kevlar. The PBO fibers are first woven into a fabric that is then irradiated using a CO2 infrared laser. From here, the fabric becomes the Janus graphene/PBO hybrid that is the focus of the study.   

The mask also utilizes a top and bottom layer of Janus graphene/PBO with a piezoelectric layer in between that acts as a way to convert mechanical pressures to electricity.

“The mask has a good smoke particle filtration effect, and the filtration efficiency of PM2.5 and PM3.0 reaches 95% and 100%, respectively. Meanwhile, the mask has good wearing comfort as its respiratory resistance (46.8 Pa) is lower than 49 Pa of commercial masks. Besides, the mask is sensitive to the speed and intensity of human breathing, which can dynamically monitor the health of the firemen” said Fan.

Flame-retardant electronics featured in these fire suits are flexible, heat resistant, quick to make and low-cost which makes scaling for industrial production a tangible achievement. This makes it more likely that the future of firefighting suits and masks will be able to effectively use this technology. Quick, effective responses can also reduce economic losses attributed to fires.

“The graphene/PBO woven fabrics-based sensors exhibit good repeatability and stability in human motion monitoring and NO2 gas detection, the main toxic gas in fires, which can be applied to firefighting suits to help firefighters effectively avoiding danger” Fan said. Being able to detect sharp increases in NO2 gas can help firefighters change course in an instant if needed and could be a lifesaving addition to firefighter gear.

Major improvements can be made in the firefighting field to better protect the firefighters by taking advantage of graphene/PBO woven and nonwoven fabrics. Widescale use of this technology can help the researchers reach their ultimate goal of reducing mortality and injury to those who risk their lives fighting fires.

Yu Luo and Yaping Miao of the School of Textile Science and Engineering at Xi’an Polytechnic University contributed equally to this work. Professor Wei Fan is the corresponding author. Yingying Zhang and Huimin Wang of the Department of Chemistry at Tsinghua University, Kai Dong of the Beijing Institute of Nanoenergy and Nanosystems at the Chinese Academy of Sciences, and Lin Hou and Yanyan Xu of Shaanxi Textile Research Institute Co., LTD, Weichun Chen and Yao Zhang of the School of Textile Science and Engineering at Xi’an Polytechnic University contributed to this research. 

This work was supported by the National Natural Science Foundation of China, Textile Vision Basic Research Program of China, Key Research and Development Program of Xianyang Science and Technology Bureau, Key Research and Development Program of Shaanxi Province, Natural Science Foundation of Shaanxi Province, and Scientific Research Project of Shaanxi Provincial Education Department.

Here are two links and a citation for the same paper,

Laser-induced Janus graphene/poly(p-phenylene benzobisoxazole) fabrics with intrinsic flame retardancy as flexible sensors and breathable electrodes for fire-fighting field by Yu Luo, Yaping Miao, Huimin Wang, Kai Dong, Lin Hou, Yanyan Xu, Weichun Chen, Yao Zhang, Yingying Zhang & Wei Fan. Nano Research (2023) DOI: https://doi.org/10.1007/s12274-023-5382-y Published12 January 2023

This link leads to a paywall.

Here’s the second link (to SciOpen)

Laser-induced Janus graphene/poly(p-phenylene benzobisoxazole) fabrics with intrinsic flame retardancy as flexible sensors and breathable electrodes for fire-fighting field. SciOpen Published January 12, 2023

This link leads to an open access journal published by Tsinghua University Press.

Memristors, it’s all about the oxides

I have one research announcement from China and another from the Netherlands, both of which concern memristors and oxides.

China

A May 17, 2021 news item on Nanowerk announces work, which suggests that memristors may not need to rely solely on oxides but could instead utilize light more gainfully,

Scientists are getting better at making neuron-like junctions for computers that mimic the human brain’s random information processing, storage and recall. Fei Zhuge of the Chinese Academy of Sciences and colleagues reviewed the latest developments in the design of these ‘memristors’ for the journal Science and Technology of Advanced Materials …

Computers apply artificial intelligence programs to recall previously learned information and make predictions. These programs are extremely energy- and time-intensive: typically, vast volumes of data must be transferred between separate memory and processing units. To solve this issue, researchers have been developing computer hardware that allows for more random and simultaneous information transfer and storage, much like the human brain.

Electronic circuits in these ‘neuromorphic’ computers include memristors that resemble the junctions between neurons called synapses. Energy flows through a material from one electrode to another, much like a neuron firing a signal across the synapse to the next neuron. Scientists are now finding ways to better tune this intermediate material so the information flow is more stable and reliable.

I had no success locating the original news release, which originated the news item, but have found this May 17, 2021 news item on eedesignit.com, which provides the remaining portion of the news release.

“Oxides are the most widely used materials in memristors,” said Zhuge. “But oxide memristors have unsatisfactory stability and reliability. Oxide-based hybrid structures can effectively improve this.”

Memristors are usually made of an oxide-based material sandwiched between two electrodes. Researchers are getting better results when they combine two or more layers of different oxide-based materials between the electrodes. When an electrical current flows through the network, it induces ions to drift within the layers. The ions’ movements ultimately change the memristor’s resistance, which is necessary to send or stop a signal through the junction.

Memristors can be tuned further by changing the compounds used for electrodes or by adjusting the intermediate oxide-based materials. Zhuge and his team are currently developing optoelectronic neuromorphic computers based on optically-controlled oxide memristors. Compared to electronic memristors, photonic ones are expected to have higher operation speeds and lower energy consumption. They could be used to construct next generation artificial visual systems with high computing efficiency.

Now for a picture that accompanied the news release, which follows,

Fig. The all-optically controlled memristor developed for optoelectronic neuromorphic computing (Image by NIMTE)

Here’s the February 7, 2021 Ningbo Institute of Materials Technology and Engineering (NIMTE) press release featuring this work and a more technical description,

A research group led by Prof. ZHUGE Fei at the Ningbo Institute of Materials Technology and Engineering (NIMTE) of the Chinese Academy of Sciences (CAS) developed an all-optically controlled (AOC) analog memristor, whose memconductance can be reversibly tuned by varying only the wavelength of the controlling light.

As the next generation of artificial intelligence (AI), neuromorphic computing (NC) emulates the neural structure and operation of the human brain at the physical level, and thus can efficiently perform multiple advanced computing tasks such as learning, recognition and cognition.

Memristors are promising candidates for NC thanks to the feasibility of high-density 3D integration and low energy consumption. Among them, the emerging optoelectronic memristors are competitive by virtue of combining the advantages of both photonics and electronics. However, the reversible tuning of memconductance depends highly on the electric excitation, which have severely limited the development and application of optoelectronic NC.

To address this issue, researchers at NIMTE proposed a bilayered oxide AOC memristor, based on the relatively mature semiconductor material InGaZnO and a memconductance tuning mechanism of light-induced electron trapping and detrapping.

The traditional electrical memristors require strong electrical stimuli to tune their memconductance, leading to high power consumption, a large amount of Joule heat, microstructural change triggered by the Joule heat, and even high crosstalk in memristor crossbars.

On the contrary, the developed AOC memristor does not involve microstructure changes, and can operate upon weak light irradiation with light power density of only 20 μW cm-2, which has provided a new approach to overcome the instability of the memristor.

Specifically, the AOC memristor can serve as an excellent synaptic emulator and thus mimic spike-timing-dependent plasticity (STDP) which is an important learning rule in the brain, indicating its potential applications in AOC spiking neural networks for high-efficiency optoelectronic NC.

Moreover, compared to purely optical computing, the optoelectronic computing using our AOC memristor showed higher practical feasibility, on account of the simple structure and fabrication process of the device.

The study may shed light on the in-depth research and practical application of optoelectronic NC, and thus promote the development of the new generation of AI.

This work was supported by the National Natural Science Foundation of China (No. 61674156 and 61874125), the Strategic Priority Research Program of Chinese Academy of Sciences (No. XDB32050204), and the Zhejiang Provincial Natural Science Foundation of China (No. LD19E020001).

Here’s a link to and a citation for the paper,

Hybrid oxide brain-inspired neuromorphic devices for hardware implementation of artificial intelligence by Jingrui Wang, Xia Zhuge & Fei Zhuge. Science and Technology of Advanced Materials Volume 22, 2021 – Issue 1 Pages 326-344 DOI: https://doi.org/10.1080/14686996.2021.1911277 Published online:14 May 2021

This paper appears to be open access.

Netherlands

In this case, a May 18, 2021 news item on Nanowerk marries oxides to spintronics,

Classic computers use binary values (0/1) to perform. By contrast, our brain cells can use more values to operate, making them more energy-efficient than computers. This is why scientists are interested in neuromorphic (brain-like) computing.

Physicists from the University of Groningen (the Netherlands) have used a complex oxide to create elements comparable to the neurons and synapses in the brain using spins, a magnetic property of electrons.

The press release, which follows, was accompanied by this image illustrating the work,

Caption: Schematic of the proposed device structure for neuromorphic spintronic memristors. The write path is between the terminals through the top layer (black dotted line), the read path goes through the device stack (red dotted line). The right side of the figure indicates how the choice of substrate dictates whether the device will show deterministic or probabilistic behaviour. Credit: Banerjee group, University of Groningen

A May 18, 2021 University of Groningen press release (also on EurekAlert), which originated the news item, adds more ‘spin’ to the story,

Although computers can do straightforward calculations much faster than humans, our brains outperform silicon machines in tasks like object recognition. Furthermore, our brain uses less energy than computers. Part of this can be explained by the way our brain operates: whereas a computer uses a binary system (with values 0 or 1), brain cells can provide more analogue signals with a range of values.

Thin films

The operation of our brains can be simulated in computers, but the basic architecture still relies on a binary system. That is why scientist look for ways to expand this, creating hardware that is more brain-like, but will also interface with normal computers. ‘One idea is to create magnetic bits that can have intermediate states’, says Tamalika Banerjee, Professor of Spintronics of Functional Materials at the Zernike Institute for Advanced Materials, University of Groningen. She works on spintronics, which uses a magnetic property of electrons called ‘spin’ to transport, manipulate and store information.

In this study, her PhD student Anouk Goossens, first author of the paper, created thin films of a ferromagnetic metal (strontium-ruthenate oxide, SRO) grown on a substrate of strontium titanate oxide. The resulting thin film contained magnetic domains that were perpendicular to the plane of the film. ‘These can be switched more efficiently than in-plane magnetic domains’, explains Goossens. By adapting the growth conditions, it is possible to control the crystal orientation in the SRO. Previously, out-of-plane magnetic domains have been made using other techniques, but these typically require complex layer structures.

Magnetic anisotropy

The magnetic domains can be switched using a current through a platinum electrode on top of the SRO. Goossens: ‘When the magnetic domains are oriented perfectly perpendicular to the film, this switching is deterministic: the entire domain will switch.’ However, when the magnetic domains are slightly tilted, the response is probabilistic: not all the domains are the same, and intermediate values occur when only part of the crystals in the domain have switched.

By choosing variants of the substrate on which the SRO is grown, the scientists can control its magnetic anisotropy. This allows them to produce two different spintronic devices. ‘This magnetic anisotropy is exactly what we wanted’, says Goossens. ‘Probabilistic switching compares to how neurons function, while the deterministic switching is more like a synapse.’

The scientists expect that in the future, brain-like computer hardware can be created by combining these different domains in a spintronic device that can be connected to standard silicon-based circuits. Furthermore, probabilistic switching would also allow for stochastic computing, a promising technology which represents continuous values by streams of random bits. Banerjee: ‘We have found a way to control intermediate states, not just for memory but also for computing.’

Here’s a link to and a citation for the paper,

Anisotropy and Current Control of Magnetization in SrRuO3/SrTiO3 Heterostructures for Spin-Memristors by A.S. Goossens, M.A.T. Leiviskä and T. Banerjee. Frontiers in Nanotechnology DOI: https://doi.org/10.3389/fnano.2021.680468 Published: 18 May 2021

This appears to be open access.

A lotus root-inspired hydrogel fiber for surgical sutures

By FotoosRobin – originally posted to Flickr as Lotus root, CC BY-SA 2.0, https://commons.wikimedia.org/w/index.php?curid=4826529

The lotus (Nelumbo nucifera) rhizome (mass of roots) is not the prettiest part of the lotus but its fibers (and presumably fiber from other parts of the lotus plant) served as inspiration for a hydrogel that might be used as a surgical suture according to a Jan. 14, 2021 news item on phys.org (Note: Links have been removed),

“The lotus roots may break, but the fiber remains joined”—an old Chinese saying that reflects the unique structure and mechanical properties of the lotus fiber. The outstanding mechanical properties of lotus fibers can be attributed to their unique spiral structure, which provides an attractive model for biomimetic design of artificial fibers.

In a new study published in Nano Letters, a team led by Prof. Yu Shuhong from the University of Science and Technology of China (USTC) of the Chinese Academy of Sciences (CAS) reported a bio-inspired lotus-fiber-mimetic spiral structure bacterial cellulose (BC) hydrogel fiber with high strength, high toughness, excellent biocompatibility, good stretchability, and high energy dissipation.

A Jan. 14, 2021 University of Science and Technology of China press release on the Chinese Academy of Sciences website (also on EurekAlert), which originated the news item, describes the new hydrogel in more detail,

Unlike polymer-based hydrogel, the newly designed biomimetic hydrogel fiber (BHF) is based on the BC hydrogel with 3D cellulose nanofiber networks produced by bacteria. The cellulose nanofibers provide the reversible hydrogen bonding network that results in unique mechanical properties.

The researchers applied a constant tangential force to the pretreated BC hydrogel along the cross-sectional direction. Then, the two sides of the hydrogel were subjected to opposite tangential forces, and local plastic deformation occurred.

The hydrogen bonds in the 3D network of cellulose nanofibers were broken by the tangential force, causing the hydrogel strip to twist spirally and the network to slip and deform. When the tangential force was removed, the hydrogen bonds reformed between the nanofibers, and the spiral structure of the fiber was fixed.

Benefited from lotus-fiber-mimetic spiral structure, the toughness of BHF can reach ?116.3 MJ m-3, which is more than nine times higher than those of non-spiralized BC hydrogel fiber. Besides, once the BHF is stretched, it is nearly non-resilient.

Combining outstanding mechanical properties with excellent biocompatibility derived from BC, BHF is a promising hydrogel fiber for biomedical material, especially for surgical suture, a commonly used structural biomedical material for wound repair.

Compared with commercial surgical suture with higher modulus, the BHF has similar modulus and strength to soft tissue, like skin. The outstanding stretchability and energy dissipation of BHF allow it to absorb energy from the tissue deformation around a wound and effectively protect the wound from rupture, which makes BHF an ideal surgical suture.

What’s more, the porous structure of BHF also allows it to adsorb functional small molecules, such as antibiotics or anti-inflammatory compounds, and sustainably release them on wounds. With an appropriate design, BHF would be a powerful platform for many medical applications.

Here’s a link to and a citation for the paper,

Bio-Inspired Lotus-Fiber-like Spiral Hydrogel Bacterial Cellulose Fibers by Qing-Fang Guan, Zi-Meng Han, YinBo Zhu, Wen-Long Xu, Huai-Bin Yang, Zhang-Chi Ling, Bei-Bei Yan, Kun-Peng Yang, Chong-Han Yin, HengAn Wu, and Shu-Hong Yu. Nano Lett. 2021, XXXX, XXX, XXX-XXX DOI: https://doi.org/10.1021/acs.nanolett.0c03707 Publication Date:January 5, 2021 Copyright © 2021 American Chemical Society

This paper is behind a paywall.

July 2020 update on Dr. He Jiankui (the CRISPR twins) situation

This was going to be written for January 2020 but sometimes things happen (e.g., a two-part overview of science culture in Canada from 2010-19 morphed into five parts with an addendum and, then, a pandemic). By now (July 28, 2020), Dr. He’s sentencing to three years in jail announced by the Chinese government in January 2020 is old news.

Regardless, it seems a neat and tidy ending to an international scientific scandal concerned with germline-editing which resulted in at least one set of twins, Lulu and Nana. He claimed to have introduced a variant (“Delta 32” variation) of their CCR5 gene. This does occur naturally and scientists have noted that people with this mutation seem to be resistant to HIV and smallpox.

For those not familiar with the events surrounding the announcement, here’s a brief recap. News of the world’s first gene-edited twins’ birth was announced in November 2018 just days before an international meeting group of experts who had agreed on a moratorium in 2015 on exactly that kind of work. The scientist making the announcement about the twins was scheduled for at least one presentation at the meeting, which was to be held in Hong Kong. He did give his presentation but left the meeting shortly afterwards as shock was beginning to abate and fierce criticism was rising. My November 28, 2018 posting (First CRISPR gene-edited babies? Ethics and the science story) offers a timeline of sorts and my initial response.

I subsequently followed up with two mores posts as the story continued to develop. My May 17, 2019 posting (Genes, intelligence, Chinese CRISPR (clustered regularly interspaced short palindromic repeats) babies, and other children) featured news that Dr. He’s gene-editing may have resulted in the twins having improved cognitive skills. Then, more news broke. The title for my June 20, 2019 posting (Greater mortality for the CRISPR twins Lulu and Nana?) is self-explanatory.

I have roughly organized my sources for this posting into two narratives, which I’m contrasting with each other. First, there is one found in the mainstream media (English language), ‘The Popular Narrative’. Second, there is story where Dr. He is viewed more sympathetically and as part of a larger community where there isn’t nearly as much consensus over what should or shouldn’t be done as ‘the popular narrative’ insists.

The popular narrative: Dr. He was a rogue scientist

A December 30, 2019 article for Fast Company by Kristin Toussaint lays out the latest facts (Note: A link has been removed),

… Now, a court in China has sentenced He to three years in prison, according to Xinhua, China’s state-run press agency, for “illegal medical practices.”

The court in China’s southern city of Shenzhen says that He’s team, which included colleagues Zhang Renli and Qin Jinzhou from two medical institutes in Guangdong Province, falsified ethical approval documents and violated China’s “regulations and ethical principles” with their gene-editing work. Zhang was sentenced to two years in jail, and Qin to 18 months with a two-year reprieve, according to Xinhau.

Ian Sample’s December 31, 2020 article for the Guardian offers more detail (Note: Links have been removed),

The court in Shenzhen found He guilty of “illegal medical practices” and in addition to the prison sentence fined him 3m yuan (£327,360), according to the state news agency, Xinhua. Two others on He’s research team received lesser fines and sentences.

“The three accused did not have the proper certification to practise medicine, and in seeking fame and wealth, deliberately violated national regulations in scientific research and medical treatment,” the court said, according to Xinhua. “They’ve crossed the bottom line of ethics in scientific research and medical ethics.”

[…] the court found He had forged documents from an ethics review panel that were used to recruit couples for the research. The couples that enrolled had a man with HIV and a woman without and were offered IVF in return for taking part.

Zhang Renli, who worked with He, was sentenced to two years in prison and fined 1m yuan. Colleague Qin Jinzhou received an 18-month sentence, but with a two-year reprieve, and a 500,000 yuan fine.

He’s experiments, which were carried out on seven embryos in late 2018, sent shockwaves through the medical and scientific world. The work was swiftly condemned for deceiving vulnerable patients and using a risky, untested procedure with no medical justification. Earlier this month, MIT Technology Review released excerpts from an early manuscript of He’s work. It casts serious doubts on his claims to have made the children immune to HIV.

Even as the scientific community turned against He, the scientist defended his work and said he was proud of having created Lulu and Nana. A third child has since been born as a result of the experiments.

Robin Lovell-Badge at the Francis Crick Institute in London said it was “far too premature” for anyone to pursue genome editing on embryos that are intended to lead to pregnancies. “At this stage we do not know if the methods will ever be sufficiently safe and efficient, although the relevant science is progressing rapidly, and new methods can look promising. It is also important to have standards established, including detailed regulatory pathways, and appropriate means of governance.”

A December 30, 2019 article, by Carolyn Y. Johnson for the Washington Post, covers much the same ground although it does go on to suggest that there might be some blame to spread around (Note: Links have been removed),

The Chinese researcher who stunned and alarmed the international scientific community with the announcement that he had created the world’s first gene-edited babies has been sentenced to three years in prison by a court in China.

He Jiankui sparked a bioethical crisis last year when he claimed to have edited the DNA of human embryos, resulting in the birth of twins called Lulu and Nana as well as a possible third pregnancy. The gene editing, which was aimed at making the children immune to HIV, was excoriated by many scientists as a reckless experiment on human subjects that violated basic ethical principles.

The judicial proceedings were not public, and outside experts said it is hard to know what to make of the punishment without the release of the full investigative report or extensive knowledge of Chinese law and the conditions under which He will be incarcerated.

Jennifer Doudna, a biochemist at the University of California at Berkeley who co-invented CRISPR, the gene editing technology that He utilized, has been outspoken in condemning the experiments and has repeatedly said CRISPR is not ready to be used for reproductive purposes.

R. Alta Charo, a fellow at Stanford’s Center for Advanced Study in the Behavioral Sciences, was among a small group of experts who had dinner with He the night before he unveiled his controversial research in Hong Kong in November 2018.

“He Jiankui is an example of somebody who fundamentally didn’t understand, or didn’t want to recognize, what have become international norms around responsible research,” Charo said. “My impression is he allowed his personal ambition to completely cloud rational thinking and judgment.”

Scientists have been testing an array of powerful biotechnology tools to fix genetic diseases in adults. There is tremendous excitement about the possibility of fixing genes that cause serious disease, and the first U.S. patients were treated with CRISPR this year.

But scientists have long drawn a clear moral line between curing genetic diseases in adults and editing and implanting human embryos, which raises the specter of “designer babies.” Those changes and any unanticipated ones could be inherited by future generations — in essence altering the human species.

“The fact that the individual at the center of the story has been punished for his role in it should not distract us from examining what supporting roles were played by others, particularly in the international scientific community and also the environment that shaped and encouraged him to push the limits,” said Benjamin Hurlbut [emphasis mine], associate professor in the School of Life Sciences at Arizona State University.

Stanford University cleared its scientists, including He’s former postdoctoral adviser, Stephen Quake, finding that Quake and others did not participate in the research and had expressed “serious concerns to Dr. He about his work.” A Rice University spokesman said an investigation continues into bioengineering professor Michael Deem, He’s former academic adviser. Deem was listed as a co-author on a paper called “Birth of Twins After Genome Editing for HIV Resistance,” submitted to scientific journals, according to MIT Technology Review.

It’s interesting that it’s only the Chinese scientists who are seen to be punished, symbolically at least. Meanwhile, Stanford clears its scientists of any wrongdoing and Rice University continues to investigate.

Watch for the Hurlbut name (son, Benjamin and father, William) to come up again in the ‘complex narrative’ section.

Criticism of the ‘twins’ CRISPR editing’ research

Antonio Regalado’s December 3, 2020 article for the MIT (Massachusetts Institute of Technology) Technology Review features comments from various experts on an unpublished draft of Dr. He Jiankui’s research

Earlier this year a source sent us a copy of an unpublished manuscript describing the creation of the first gene-edited babies, born last year in China. Today, we are making excerpts of that manuscript public for the first time.

Titled “Birth of Twins After Genome Editing for HIV Resistance,” and 4,699 words long, the still unpublished paper was authored by He Jiankui, the Chinese biophysicist who created the edited twin girls. A second manuscript we also received discusses laboratory research on human and animal embryos.

The metadata in the files we were sent indicate that the two draft papers were edited by He in late November 2018 and appear to be what he initially submitted for publication. Other versions, including a combined manuscript, may also exist. After consideration by at least two prestigious journals, Nature and JAMA, his research remains unpublished.

The text of the twins paper is replete with expansive claims of a medical breakthrough that can “control the HIV epidemic.” It claims “success”—a word used more than once—in using a “novel therapy” to render the girls resistant to HIV. Yet surprisingly, it makes little attempt to prove that the twins really are resistant to the virus. And the text largely ignores data elsewhere in the paper suggesting that the editing went wrong.

We shared the unpublished manuscripts with four experts—a legal scholar, an IVF doctor, an embryologist, and a gene-editing specialist—and asked them for their reactions. Their views were damning. Among them: key claims that He and his team made are not supported by the data; the babies’ parents may have been under pressure to agree to join the experiment; the supposed medical benefits are dubious at best; and the researchers moved forward with creating living human beings before they fully understood the effects of the edits they had made.

1. Why aren’t the doctors among the paper’s authors?

The manuscript begins with a list of the authors—10 of them, mostly from He Jiankui’s lab at the Southern University of Science and Technology, but also including Hua Bai, director of an AIDS support network, who helped recruit couples, and Michael Deem, an American biophysicist whose role is under review by Rice University. (His attorney previously said Deem never agreed to submit the manuscript and sought to remove his name from it.)

It’s a small number of people for such a significant project, and one reason is that some names are missing—notably, the fertility doctors who treated the patients and the obstetrician who delivered the babies. Concealing them may be an attempt to obscure the identities of the patients. However, it also leaves unclear whether or not these doctors understood they were helping to create the first gene-edited babies.

To some, the question of whether the manuscript is trustworthy arises immediately.

Hank Greely, professor of law, Stanford University: We have no, or almost no, independent evidence for anything reported in this paper. Although I believe that the babies probably were DNA-edited and were born, there’s very little evidence for that. Given the circumstances of this case, I am not willing to grant He Jiankui the usual presumption of honesty. 

That last article by Regalado is the purest example I have of how fierce the criticism is and how almost all of it is focused on Dr. He and his Chinese colleagues.

A complex, measured narrative: multiple players in the game

The most sympathetic and, in many ways, the most comprehensive article is an August 1, 2019 piece by Jon Cohen for Science magazine (Note: Links have been removed),

On 10 June 2017, a sunny and hot Saturday in Shenzhen, China, two couples came to the Southern University of Science and Technology (SUSTech) to discuss whether they would participate in a medical experiment that no researcher had ever dared to conduct. The Chinese couples, who were having fertility problems, gathered around a conference table to meet with He Jiankui, a SUSTech biophysicist. Then 33, He (pronounced “HEH”) had a growing reputation in China as a scientist-entrepreneur but was little known outside the country. “We want to tell you some serious things that might be scary,” said He, who was trim from years of playing soccer and wore a gray collared shirt, his cuffs casually unbuttoned.

He simply meant the standard in vitro fertilization (IVF) procedures. But as the discussion progressed, He and his postdoc walked the couples through informed consent forms [emphasis mine] that described what many ethicists and scientists view as a far more frightening proposition. Seventeen months later, the experiment triggered an international controversy, and the worldwide scientific community rejected him. The scandal cost him his university position and the leadership of a biotech company he founded. Commentaries labeled He, who also goes by the nickname JK, a “rogue,” “China’s Frankenstein,” and “stupendously immoral.” [emphases mine]

But that day in the conference room, He’s reputation remained untarnished. As the couples listened and flipped through the forms, occasionally asking questions, two witnesses—one American, the other Chinese—observed [emphasis mine]. Another lab member shot video, which Science has seen [emphasis mine], of part of the 50-minute meeting. He had recruited those couples because the husbands were living with HIV infections kept under control by antiviral drugs. The IVF procedure would use a reliable process called sperm washing to remove the virus before insemination, so father-to-child transmission was not a concern. Rather, He sought couples who had endured HIV-related stigma and discrimination and wanted to spare their children that fate by dramatically reducing their risk of ever becoming infected. [emphasis mine]

He, who for much of his brief career had specialized in sequencing DNA, offered a potential solution: CRISPR, the genome-editing tool that was revolutionizing biology, could alter a gene in IVF embryos to cripple production of an immune cell surface protein, CCR5, that HIV uses to establish an infection. “This technique may be able to produce an IVF baby naturally immunized against AIDS,” one consent form read.[emphasis mine]

The couples’ children could also pass the protective mutation to future generations. The prospect of this irrevocable genetic change is why, since the advent of CRISPR as a genome editor 5 years earlier, the editing of human embryos, eggs, or sperm has been hotly debated. The core issue is whether such germline editing would cross an ethical red line because it could ultimately alter our species. Regulations, some with squishy language, arguably prohibited it in many countries, China included.

Yet opposition was not unanimous. A few months before He met the couples, a committee convened by the U.S. National Academies of Sciences, Engineering, and Medicine (NASEM) concluded in a well-publicized report that human trials of germline editing “might be permitted” if strict criteria were met. The group of scientists, lawyers, bioethicists, and patient advocates spelled out a regulatory framework but cautioned that “these criteria are necessarily vague” because various societies, caregivers, and patients would view them differently. The committee notably did not call for an international ban, arguing instead for governmental regulation as each country deemed appropriate and “voluntary self-regulation pursuant to professional guidelines.”

[…] He hid his plans and deceived his colleagues and superiors, as many people have asserted? A preliminary investigation in China stated that He had forged documents, “dodged supervision,” and misrepresented blood tests—even though no proof of those charges was released [emphasis mine], no outsiders were part of the inquiry, and He has not publicly admitted to any wrongdoing. (CRISPR scientists in China say the He fallout has affected their research.) Many scientists outside China also portrayed He as a rogue actor. “I think there has been a failure of self-regulation by the scientific community because of a lack of transparency,” virologist David Baltimore, a Nobel Prize–winning researcher at the California Institute of Technology (Caltech) in Pasadena and co-chair of the Hong Kong summit, thundered at He after the biophysicist’s only public talk on the experiment.

Because the Chinese government has revealed little and He is not talking, key questions about his actions are hard to answer. Many of his colleagues and confidants also ignored Science‘s requests for interviews. But Ryan Ferrell, a public relations specialist He hired, has cataloged five dozen people who were not part of the study but knew or suspected what He was doing before it became public. Ferrell calls it He’s circle of trust. [emphasis mine]

That circle included leading scientists—among them a Nobel laureate—in China and the United States, business executives, an entrepreneur connected to venture capitalists, authors of the NASEM report, a controversial U.S. IVF specialist [John Zhang] who discussed opening a gene-editing clinic with He [emphasis mine], and at least one Chinese politician. “He had an awful lot of company to be called a ‘rogue,’” says geneticist George Church [emphases mine], a CRISPR pioneer at Harvard University who was not in the circle of trust and is one of the few scientists to defend at least some aspects of He’s experiment.

Some people sharply criticized He when he brought them into the circle; others appear to have welcomed his plans or did nothing. Several went out of their way to distance themselves from He after the furor erupted. For example, the two onlookers in that informed consent meeting were Michael Deem, He’s Ph.D. adviser at Rice University in Houston, Texas, and Yu Jun, a member of the Chinese Academy of Sciences (CAS) and co-founder of the Beijing Genomics Institute, the famed DNA sequencing company in Shenzhen. Deem remains under investigation by Rice for his role in the experiment and would not speak with Science. In a carefully worded statement, Deem’s lawyers later said he “did not meet the parents of the reported CCR5-edited children, or anyone else whose embryos were edited.” But earlier, Deem cooperated with the Associated Press (AP) for its exclusive story revealing the birth of the babies, which reported that Deem was “present in China when potential participants gave their consent and that he ‘absolutely’ thinks they were able to understand the risks. [emphasis mine]”

Yu, who works at CAS’s Beijing Institute of Genomics, acknowledges attending the informed consent meeting with Deem, but he told Science he did not know that He planned to implant gene-edited embryos. “Deem and I were chatting about something else,” says Yu, who has sequenced the genomes of humans, rice, silkworms, and date palms. “What was happening in the room was not my business, and that’s my personality: If it’s not my business, I pay very little attention.”

Some people who know He and have spoken to Science contend it is time for a more open discussion of how the biophysicist formed his circle of confidants and how the larger circle of trust—the one between the scientific community and the public—broke down. Bioethicist William Hurlbut at Stanford University [emphasis mine] in Palo Alto, California, who knew He wanted to conduct the embryo-editing experiment and tried to dissuade him, says that He was “thrown under the bus” by many people who once supported him. “Everyone ran for the exits, in both the U.S. and China. I think everybody would do better if they would just openly admit what they knew and what they did, and then collectively say, ‘Well, people weren’t clear what to do. We should all admit this is an unfamiliar terrain.’”

Steve Lombardi, a former CEO of Helicos, reacted far more charitably. Lombardi, who runs a consulting business in Bridgewater, Connecticut, says Quake introduced him to He to help find investors for Direct Genomics. “He’s your classic, incredibly bright, naïve entrepreneur—I run into them all the time,” Lombardi says. “He had the right instincts for what to do in China and just didn’t know how to do it. So I put him in front of as many people as I could.” Lombardi says He told him about his embryo-editing ambitions in August 2017, asking whether Lombardi could find investors for a new company that focused on “genetic medical tourism” and was based in China or, because of a potentially friendlier regulatory climate, Thailand. “I kept saying to him, ‘You know, you’ve got to deal with the ethics of this and be really sure that you know what you’re doing.’”

In April 2018, He asked Ferrell to handle his media full time. Ferrell was a good fit—he had an undergraduate degree in neuroscience, had spent a year in Beijing studying Chinese, and had helped another company using a pre-CRISPR genome editor. Now that a woman in the trial was pregnant, Ferrell says, He’s “understanding of the gravity of what he had done increased.” Ferrell had misgivings about the experiment, but he quit HDMZ and that August moved to Shenzhen. With the pregnancy already underway, Ferrell reasoned, “It was going to be the biggest science story of that week or longer, no matter what I did.”

MIT Technology Review had broken a story early that morning China time, saying human embryos were being edited and implanted, after reporter Antonio Regalado discovered descriptions of the project that He had posted online, without Ferrell’s knowledge, in an official Chinese clinical trial registry. Now, He gave AP the green light to post a detailed account, which revealed that twin girls—whom He, to protect their identifies, named Lulu and Nana—had been born. Ferrell and He also posted five unfinished YouTube videos explaining and justifying the unprecedented experiment.

“He was fearful that he’d be unable to communicate to the press and the onslaught in a way that would be in any way manageable for him,” Ferrell says. One video tried to forestall eugenics accusations, with He rejecting goals such as enhancing intelligence, changing skin color, and increasing sports performance as “not love.” Still, the group knew it had lost control of the news. [emphasis mine]

… On 7 March 2017, 5 weeks after the California gathering, He submitted a medical ethics approval application to the Shenzhen HarMoniCare Women and Children’s Hospital that outlined the planned CCR5 edit of human embryos. The babies, it claimed, would be resistant to HIV as well as to smallpox and cholera. (The natural CCR5 mutation may have been selected for because it helps carriers survive smallpox and plague, some studies suggest—but they don’t mention cholera.) “This is going to be a great science and medicine achievement ever since the IVF technology which was awarded the Nobel Prize in 2010, and will also bring hope to numerous genetic disease patients,” the application says. Seven people on the ethics committee, chaired by Lin Zhitong—a one-time Direct Genomics director and a HarMoniCare administrator—signed the application, indicating they approved it.

[…] John Zhang, […] [emphasis mine] earned his medical degree in China and a Ph.D. in reproductive biology at the University of Cambridge in the United Kingdom. Zhang had made international headlines himself in September 2016, when New Scientist revealed that he had created the world’s first “three-parent baby” by using mitochondrial DNA from a donor egg to revitalize the egg of a woman with infertility and then inseminating the resulting egg. “This technology holds great hope for ladies with advanced maternal age to have their own children with their own eggs,” Zhang explains in the center’s promotional video, which alternates between Chinese and English. It does not mention that Zhang did the IVF experiment in Mexico because it is not now allowed in the United States. [emphasis mine]

When Science contacted Zhang, the physician initially said he barely knew He: [emphases mine] “I know him just like many people know him, in an academic meeting.”

After his talk [November 2018 at Hong Kong meeting], He immediately drove back to Shenzhen, and his circle of trust began to disintegrate. He has not spoken publicly since. “I don’t think he can recover himself through PR,” says Ferrell, who no longer works for He but recently started to do part-time work for He’s wife. “He has to do other service to the world.”

Calls for a moratorium on human germline editing have increased, although at the end of the Hong Kong summit, the organizing committee declined in its consensus to call for a ban. China has stiffened its regulations on work with human embryos, and Chinese bioethicists in a Nature editorial about the incident urged the country to confront “the eugenic thinking that has persisted among a small proportion of Chinese scholars.”

Church, who has many CRISPR collaborations in China, finds it inconceivable that He’s work surprised the Chinese government. China has “the best surveillance system in the world,” he says. “I conclude that they were totally aware of what he was doing at every step of the way, especially because he wasn’t particularly secretive about it.”

Benjamin Hurlbut, William’s son and a historian of biomedicine at Arizona State University in Tempe, says leaders in the scientific community should take a hard look at their actions, too. [emphases mine] He thinks the 2017 NASEM report helped give rise to He by following a well-established approach to guiding science: appointing an elite group to decide how scientists should be regulated. Benjamin Hurlbut, whose book Experiments in Democracy explores the governance of embryo research and bioethics, questions why small, scientist-led groups—à la the totemic Asilomar conference held in 1975 to discuss the future of recombinant DNA research—are seen as the best way to shape thinking about new technologies. Hurlbut has called for a “global observatory for gene editing” to convene meetings with diverse perspectives.

The prevailing notion that the scientific community simply “failed to see the rogue among the responsible,” Hurlbut says, is a convenient narrative for those scientific leaders and inhibits their ability to learn from such failures. [emphases mine] “It puts them on the right side of history,” he says. They failed to paint a bright enough red line, Hurlbut contends. “They are not on the right side of history because they contributed to this.”

If you have the time, I strongly recommend reading Cohen’s piece in its entirety. You’ll find links to the reports and more articles with in-depth reporting on this topic.

A little kindness and no regrets

William Hurlbut was interviewed in an As it happens (Canadian Broadcasting Corporation’ CBC) radio programme segment on December 30, 2020. This is an excerpt from the story transcript written by Sheena Goodyear (Note: A link has been removed),

Dr. William Hurlbut, a physician and professor of neural-biology at Stanford University, says he tried to warn He to slow down before it was too late. Here is part of his conversation with As It Happens guest host Helen Mann.

What was your reaction to the news that Dr. He had been sentenced to three years in prison?

My first reaction was one of sadness because I know Dr. He — who we call J.K., that’s his nickname.

I spent quite a few hours talking with him, and I’m just sad that this worked out this way. It didn’t work out well for him or for his country or for the world, in some sense.

Except the one good thing is it’s alerted us, it’s awakened the world, to the seriousness of the issues that are coming down toward us with biotechnology, especially in genetics.

How does he feel about [how] not just the Chinese government, but the world generally, responded to his experiment?

He was surprised, personally. But I had actually warned him that he was proceeding too fast, and I didn’t know he had implanted embryos.

We had several conversations before this was disclosed, and I warned him to go more slowly and to keep in conversation with the rest of the international scientific community, and more broadly the international perspectives on social and ethical matters.

He was doing that to some extent, but not deeply enough and not transparently enough.

It sounds like you were very thoughtful in the conversations you had with him and the advice you gave him. And I guess you operated with what you had. But do you have any regrets yourself?

I don’t have any regrets about the way I conducted myself. I regret that this happened this way for J.K., who is a very bright person, and a very nice person, a humble person.

He grew up in a poor urban farming village. He told me that at one point he wanted to ask out a certain girl that he thought was really pretty … but he was embarrassed to do so because her family owned the restaurant. And so you see how humble his origins were.

By the way, he did end up asking her out and he ended up marrying her, which is a happy story, except now they’re separated for years of crucial time, and they have little children. 

I know this is a bigger story than just J.K. and his family. But there’s a personal story to it too.

What happens He Jiankui? … Is his research career over?

It’s hard to imagine that a nation like China would not give him some some useful role in their society. A very intelligent and very well-educated young man. 

But on the other hand, he will be forever a sign of a very crucial and difficult moment for the human species. He’s not going outlive that.

It’s going to be interesting. I hope I get a chance to have good conversations with him again and hear his internal ruminations and perspectives on it all.

This (“I don’t have any regrets about the way I conducted myself”) is where Hurlbut lost me. I think he could have suggested that he’d reviewed and rethought everything and feels that he and others could have done better and maybe they need to rethink how scientists are trained and how we talk about science, genetics, and emerging technology. Interestingly, it’s his son who comes up with something closer to what I’m suggesting (this excerpt was quoted earlier in this posting from a December 30, 2019 article, by Carolyn Y. Johnson for the Washington Post),

“The fact that the individual at the center of the story has been punished for his role in it should not distract us from examining what supporting roles were played by others, particularly in the international scientific community and also the environment that shaped and encouraged him to push the limits,” said Benjamin Hurlbut [emphasis mine], associate professor in the School of Life Sciences at Arizona State University.

The man who CRISPRs himself approves

Josiah Zayner publicly injected himself with CRISPR in a demonstration (see my January 25, 2018 posting for details about Zayner, his demonstration, and his plans). As you might expect, his take on the He affair is quite individual. From a January 2, 2020 article for STAT, Zayner presents the case for Dr. He’s work (Note: Links have been removed),

When I saw the news that He Jiankui and colleagues had been sentenced to three years in prison for the first human embryo gene editing and implantation experiments, all I could think was, “How will we look back at what they had done in 100 years?”

When the scientist described his research and revealed the births of gene edited twin girls at the [Second] International Summit on Human Genome Editing in Hong Kong in late November 2018, I stayed up into the early hours of the morning in Oakland, Calif., watching it. Afterward, I couldn’t sleep for a few days and couldn’t stop thinking about his achievement.

This was the first time a viable human embryo was edited and allowed to live past 14 days, much less the first time such an embryo was implanted and the baby brought to term.

The majority of scientists were outraged at the ethics of what had taken place, despite having very little information on what had actually occurred.

To me, no matter how abhorrent one views [sic] the research, it represents a substantial step forward in human embryo editing. Now there is a clear path forward that anyone can follow when before it had been only a dream.

As long as the children He Jiankui engineered haven’t been harmed by the experiment, he is just a scientist who forged some documents to convince medical doctors to implant gene-edited embryos. The 4-minute mile of human genetic engineering has been broken. It will happen again.

The academic establishment and federal funding regulations have made it easy to control the number of heretical scientists. We rarely if ever hear of individuals pushing the ethical and legal boundaries of science.

The rise of the biohacker is changing that.

A biohacker is a scientist who exists outside academia or an institution. By this definition, He Jiankui is a biohacker. I’m also part of this community, and helped build an organization to support it.

Such individuals have much more freedom than “traditional” scientists because scientific regulation in the U.S. is very much institutionally enforced by the universities, research organizations, or grant-giving agencies. But if you are your own institution and don’t require federal grants, who can police you? If you don’t tell anyone what you are doing, there is no way to stop you — especially since there is no government agency actively trying to stop people from editing embryos.

… When a human embryo being edited and implanted is no longer interesting enough for a news story, will we still view He Jiankui as a villain?

I don’t think we will. But even if we do, He Jiankui will be remembered and talked about more than any scientist of our day. Although that may seriously aggravate many scientists and bioethicists, I think he deserves that honor.

Josiah Zayner is CEO of The ODIN, a company that teaches people how to do genetic engineering in their homes.

You can find The ODIN here.

Final comments

There can’t be any question that this was inevitable. One needs only to take a brief stroll through the history of science to know that scientists are going to push boundaries or, as in this case, press past an ill-defined grey zone.

The only scientists who are being publicly punished for hubris are Dr. He Jiankui and his two colleagues in China. Dr. Michael Deem is still working for Rice University as far as I can determine. Here’s how the Wikipedia entry for the He Jiankui Affair describes the investigation (Note: Links have been removed),

Michael W. Deem, an American bioengineering professor at Rice University and He’s doctoral advisor, was involved in the research, and was present when people involved in He’s study gave consent.[24] He was the only non-Chinese out of 10 authors listed in the manuscript submitted to Nature.[30] Deem came under investigation by Rice University after news of the work was made public.[58] As of 31 December 2019, the university had not released a decision.[59] [emphasis mine]

Meanwhile the scientists at Stanford are cleared. While there are comments about the Chinese government not being transparent, it seems to me that US universities are just as opaque.

What seems missing from all this discussion and opprobrium is that the CRISPR technology itself is problematic. My September 20, 2019 post features research into off-target results from CRISPR gene-editing and, prior, there was this July 17, 2018 posting (The CRISPR [clustered regularly interspaced short palindromic repeats]-CAS9 gene-editing technique may cause new genetic damage kerfuffle).

I’d like to see more discussion and, in line with Benjamin Hurlbut’s thinking, I’d like to see more than a small group of experts talking to each other as part of the process especially here in Canada and in light of efforts to remove our ban on germline-editing (see my April 26, 2019 posting for more about those efforts).

Artificial nose for intelligent olfactory substitution

The signal transmitted into mouse brain can participate in mouse perception and act as the brain stimulator. (Image credit: Prof. ZHAN Yang)

I’m fascinated by the image. Are they suggesting putting implants into people’s brains that can sense dangerous gaseous molecules and convert that into data which can be read on a smartphone? And, are they harvesting bioenergy to supply energy to the implant?

A July 29, 2019 news item on Azonano was not as helpful in answering my questions as I’d hoped (Note: A link has been removed),

An artificial olfactory system based on a self-powered nano-generator has been built by Prof. ZHAN Yang’s team at the Shenzhen Institutes of Advanced Technology (SIAT) of the Chinese Academy of Sciences [CAS], together with colleagues at the University of Electronic Science and Technology of China.

The device, which can detect a variety of odor molecules and identify different odors, has been demonstrated in vivo in animal models. The research titled “An artificial triboelectricity-brain-behavior closed loop for intelligent olfactory substitution” has been reported in Nano Energy.

A July 25, 2019 CAS press release, which originated the news item, provides a little more information,

Odor processing is important to many species. Specific olfactory receptors located on the neurons are involved in odor recognition. These different olfactory receptors form patterned distribution.

Inspired by the biological receptors, the teams collaborated on formulating an artificial olfactory system. Through nano-fabrication on the soft materials and special alignment of material structures, the teams built a self-power device that can code and differentiate different odorant molecules.

This device has been connected to the mouse brain to demonstrate that the olfactory signals can produce appropriate neural stimulation. When the self-powered device generated the electric currents, the mouse displayed behavioral motion changes.

This study, inspired by the biological olfactory system, provides insights on novel design of neural stimulation and brain-machine interface. 

Here’s a link to and a citation for the paper,

An artificial triboelectricity-brain-behavior closed loop for intelligent olfactory substitution by Tianyan Zhong, Mengyang Zhang, Yongming Fu, Yechao Han, Hongye Guan, Haoxuan He, Tianming Zhao, Lili Xing, Xinyu Xue, Yan Zhang, Yang Zhan.Nano Energy Volume 63, September 2019, 103884 DOI: https://doi.org/10.1016/j.nanoen.2019.103884

This paper is behind a paywall.

Nanowires with fast infrared light (IR) response and more

An April 10, 2019 news item on Nanowerk points the way to improved high-speed communication with nanowires (Note: A link has been removed),

Chinese scientists have synthesized new nanowires with high carrier mobility and fast infrared light (IR) response, which could help in high-speed communication. Their findings were published in Nature Communications (“Ultra-fast photodetectors based on high-mobility indium gallium antimonide nanowires”).

Below, you will find an image illustrating the researchers’ work ,

Caption: The growth mechanism and fast 1550 nm IR detection of the single-crystalline In0.28Ga0.72Sb ternary nanowires Credit: HAN Ning

An April 10, 2019 Chinese Academy of Sciences news release (also on EurekAlert), which originated the news item, provides more detail,

Nowadays, effective optical communications use 1550 nm IR, which is received and converted into an electrical signal for computer processing. Fast light-to-electrical conversion is thus essential for high-speed communications.

According to quantum theory, 1550 nm IR has energy of ~ 0.8 eV, and can only be detected by semiconductors with bandgaps lower than 0.8 eV, such as germanium (0.66 eV) and III-V compound materials such as InxGa1-xAs (0.35-1.42 eV) and InxGa1-xSb (0.17-0.73 eV). However, those materials usually have huge crystal defects, which cause substantial degradation of photoresponse performance.

Scientists from the Institute of Process Engineering (IPE) of the Chinese Academy of Sciences, City University of Hong Kong (CityU) and their collaborators synthesized highly crystalline ternary In0.28Ga0.72Sb nanowires to demonstrate high carrier mobility and fast IR response.

In this study, the In0.28Ga0.72Sb nanowires (bandgap 0.69 eV) showed a high responsivity of 6000 A/W to IR with high response and decay times of 0.038ms and 0.053ms, respectively, which are some of the best times so far. The fast IR response speed can be attributed to the minimized crystal defects, as also illustrated by a high hole mobility of up to 200 cm2/Vs, according to Prof. Johnny C. Ho from CityU.

The minimized crystal defect is achieved by a “catalyst epitaxy technology” first established by Ho’s group. Briefly, the III-V compound nanowires are catalytically grown by a metal catalyst such as gold, nickel, etc.

“These catalyst nanoparticles play a key role in nanowire growth as the nanowires are synthesized layer by layer with the atoms well aligned with those in the catalyst,” said HAN Ning, a professor at IPE and senior author of the paper.

Here’s a link to and a citation for the paper,

Ultra-fast photodetectors based on high-mobility indium gallium antimonide nanowires by Dapan Li, Changyong Lan, Arumugam Manikandan, SenPo Yip, Ziyao Zhou, Xiaoguang Liang, Lei Shu, Yu-Lun Chueh, Ning Han & Johnny C. Ho. Nature Communicationsvolume 10, Article number: 1664 (2019) DOI: https://doi.org/10.1038/s41467-019-09606-y Published 10 April 2019

This paper is open access.

‘Xuan paper’ made fire-resistant with nanowires

Xuan paper is special being both rare and used for calligraphy and art works. Before getting to the ‘fire-resistant’ news, it might be helpful to get some details about Xuan paper as it is typically prepared and used (from a Dec. 29, 2018 news item on xinhuanet.com),

Today’s Chinese artists now have the opportunity to preserve their works much longer than the masters who painted hundreds of years ago.

Chinese researchers have developed a non-flammable version of Xuan paper that has high thermal stability, according to the Chinese Academy of Sciences (CAS).

Xuan paper, a type of handmade paper, was originally produced in ancient China and used for both Chinese calligraphy and paintings. The procedure of making Xuan paper was listed as a world intangible cultural heritage by UNESCO in 2009.

The raw materials need to produce Xuan paper are found in Jingxian County, east China’s Anhui Province and as of late, are in short supply.

The traditional handmade method of Xuan paper involves more than 100 steps and takes nearly two years [emphasis mine]. It has a low output and high cost. Xuan paper made with organic materials often suffers from degradation, yellowing and deteriorating properties during the long-term natural aging process.

Furthermore, the most lethal problem of traditional Xuan paper is its high flammability.

A January 18, 2019 news item on Nanowerk adds a few more details about the traditional paper while describing the ‘new’ Xuan paper (Note: A link has been removed),

Xuan paper is an excellent example of the traditional handmade paper, and features excellent properties of durability, ink wetting, and resistance to insects and mildew. Its excellent durability is attributed to its unique raw materials and handmade manufacturing process under mild conditions.

The bark of pteroceltis tatarinowii, a common species of elm in the area, is used as the main raw material to produce Xuan paper. Limestone particles are deposited on the surface of pteroceltis bark fibers, which can neutralize acids produced by the hydrolysis of plant fibers and from the environment.

Since the raw materials are only produced in Jing County, Anhui Province, China, Xuan paper suffers from a severe shortage. Also, it has the shortcomings such as complicated traditional hand making process and flammability. In a recent paper published in ACS Sustainable Chemistry & Engineering (“Fire-Resistant Inorganic Analogous Xuan Paper with Thousands of Years’ Super-Durability”), a team led by Prof. ZHU Yingjie from Shanghai Institute of Ceramics of Chinese Academy of Sciences developed a new kind of “fire-resistant Xuan paper” based on ultralong hydroxyapatite nanowires.

A January 18, 2019 Chinese Academy of Sciences (CAS) press release, which originated the news item, provides more technical details,

The unique integral structure of the “fire-resistant Xuan paper” with excellent mechanical properties and high flexibility was designed to be similar to the reinforced concrete structure in tall buildings. Ultralong hydroxyapatite nanowires are used as the main building material and are similar to the concrete. Silica glass fibers with micrometer-sized diameters are used as the reinforcing framework material and are similar to supporting steel bars.
In addition, a new kind of inorganic adhesive composed of amorphous nanoparticles was designed, prepared and used as the binder in the “fire-resistant Xuan paper”.

The as-prepared “fire-resistant Xuan paper” well keeps its properties even after the simulated aging for up to 3000 years.

The original whiteness of the “fire-resistant Xuan paper” is 92%, and its whiteness has a slight decrease to 91.6%, with the whiteness retention as high as 99.6% after the simulated aging for 2000 years. Even after the simulated aging for 3000 years, its whiteness only decreases to 86.7% with 94.2% of the whiteness retention. It is much higher than that of the traditional Xuan paper. The whiteness of the traditional unprocessed Xuan paper decreases from initial 70.5% to 47.3% with 67.1% of the whiteness retention after the simulated aging for 2000 years. Its whiteness decreases to 42.2% with 59.9% of the whiteness retention after the simulated aging for 3000 years.

The “fire-resistant Xuan paper” exhibits superior mechanical properties during the simulated aging process.

The retention percentage of tensile strength of the “fire-resistant Xuan paper” is as high as 95.2% aging for 2000 years, and 81.3% aging for 3000 years. In contrast, the average retention percentage of tensile strength of the unprocessed Xuan paper is only 54.9% aging for 2000 years, and 40.4% aging for 3000 years. Furthermore, the “fire-resistant Xuan paper” has an excellent ink wetting performance, which is mainly attributed to the nanoscale porous structure and hydroxyl groups of utralong hydroxyapatite nanowires.

The prevention of mould growth on the paper is a great challenge, because the mould can cause the deterioration of the Xuan paper. In this study, experiments showed that different kinds of mould spores do not breed and spread on the “fire-resistant Xuan paper”, and it is able to maintain a clean surface without the growth of any mould, indicating the excellent anti-mildew performance of the “fire-resistant Xuan paper” even exposure to the external nutrients. On the contrary, the growth and spread of mould are obviously observed on the traditional Xuan paper in the presence of external nutrients, indicating that its anti-mildew performance is not satisfactory.

The most important property is that the “fire-resistant Xuan paper” is fire resistant and highly thermal stable. Thus it can prevent the precious calligraphy and painting works as well as books, documents, and archives from the damage by fire. In addition, the production process of the “fire-resistant Xuan paper” is simple, highly efficient, and it only needs 3~4 days to produce.

Xuan paper is the best material carrier for the calligraphy and painting arts, many of which have been well preserved for hundreds of years.

Here’s a link to and a citation for the paper,

Fire-Resistant Inorganic Analogous Xuan Paper with Thousands of Years’ Super-Durability by Li-Ying Dong and Ying-Jie Zhu. ACS Sustainable Chem. Eng., 2018, 6 (12), pp 17239–17251 DOI: 10.1021/acssuschemeng.8b04630 Publication Date (Web): November 7, 2018

Copyright © 2018 American Chemical Society

This paper is behind a paywall.

One last thing, the researchers have made an image illustrating their work available,

Courtesy: CAS and American Chemical Society